| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1611 |
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| Symbol | |
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| ID | 4077713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1719249 |
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| End bp | 1723772 |
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| Gene Length | 4524 bp |
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| Protein Length | 1507 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006924 |
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| Product | hypothetical protein |
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| Protein accession | YP_613606 |
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| Protein GI | 99081452 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.405784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGTAA TCCCAGTTGG CGCGCTACAT GCCGAAGCAT CGATGGAAAC AGCCTCGTTT
GAGGCCGGTA GTGCGAGAGC GCGCAAGGCA CTCGGTTATC TTCGTGGTGG GTTTGAGGAG
ACCAGCCGAG ATGCATTGCG CCACGCCGAG GGGATGGCGC GGTCTTGGGA TGATGGTTTC
AAGAAAGCAG CTTCGGCAGC ACAGAAGCAA ATCGATGCGC TGACAGGTGT GGAACGGGCG
TCCAACTCGG CTTCGGCTTC TGCAAAGCTG TGGGCAGGGC AATTGGATCG GCAAGCCAAA
TCCTTTGATC GGCTGCGCTC AACGCTCGAT CCTGTCTACG CTTCATCCAA ACGGTATGAG
GCTGCGGTAC AGCAGGCTGA AAATGCTGTG CGTTCCGGTA TCGTCACGCA GCAAGAAGCA
AACCGCGTCA TGCAGCTGGC AGAGCAGCGA TATTTGGGCA CTTCGTCAGC GGCCGATAAG
GCTTCCACGC CAACGAGAGG CTTTCTTGGG CTGTTTTCCA AGGAGCGAAG CCATGATCTG
AGGCAGATTG GCCTTCAGCT GAGCCAGGTG GGCCAACAAG GATCTGTTAC TGGCGACTAT
CTCGGAGCGG CTGCAATTCA GGCTGCCGAT ATTGGCGCCA TGTTCGGGAT TGCCGGTATT
GCAGCCGGTA CCCTCATCAG CGTGCTGGGG CCAATGGCTG TTGGGCTACT CGAGGTAGGT
GATGCTTCAA GGGAAATGGA GGAACAGTCT CGCCTGAATT CTGAAGCGAT GGGCGAGCTT
GTTGGGGCGC TCGACGATTA CACGCTGTAT GCTGACGCCG CGCGTCGTGG AACTCTGGAG
CTAATAGAAG AGTTTGGCAT CTTTGCTGCG GACGTCAAAG AGACCTACGA GTATCTCTCT
GGAGTCTCGA TAAAGCGCGC ACTGGATGGT TTGCAAACTG AGAACTTTGA TCTTTTTGCG
AACCTGAGTG ATGCTGCATC TGCCATTTCT GCCATGGAAG ATGCACTTGC CGCGTTGGAG
CGAAACAAGT CGATCGGAGC CACCTCTGAA CAGATCCAAA CATTCAAGGA GAACTTCGAG
GCACTTGAAG AGGATGCTTA TGTCGCCGCT CAAGCCGTCG GGCTGATGCC CGAAGAAATT
CGCGCTATCA AGGCAGGCTT TGACGAGCTT CGTGGAGCAC AGGCGCTTGA GGACATCCAA
AGAGAGTCTA AAGAAGCCCT AGATATCATT CGAGAGTTCT ACCCTGAGGG ACAAAAGCTG
CCTTCAGCTT TGACAGATGC AGTAGTTCAG CTGGAGGCCA TCATTACGGC ATCCAGCAGG
GCGGTGTCCG ACACCGAGGA GGCCACCTCT CAGACGATAC GCTGGGCCGA CGCCATGATG
GGTGTCAACT CTGAGATCCA AGCGATCATG TCGTCACTGT CTGCAATCGG CGGCGGCATG
CTCTCTAACG CGGCGAAGTT CGTGGAAATC GAAGCGCTGC AATCCGGTAA GTCGATCAAG
GCAGCGCGCC AAGAGGCCGA GCTATTCAAT CGAGAGACCG ATTGGAACGC CCGCTCGCAA
GGTGCGAATG TTTTTGAGCT GATGGCGATT GAGGCTGAGA GATGGGTTTT CCGCTCGGGA
CAGGCTGCGG ATATCATGCT GGATAAAGAG CGCGAAGCCG CTCGCGAGAG AGAGCGTGCA
CTGAACAAGG TGTCCTCTGC CAGCGGCAAG TCCACCAAGG CGCTTGAAAA CGAGCTTAAG
GCTCTCAAAG CATCTCTCGA CCCAATGGAG GCTTATCGGC AAGAGCTGGA AAAACTGGCT
AGGTTCCAAG GTGTTTTGTC CGAGGATGAA ATGGCGCGCG CGATGCGCAA CCTCAACGTT
GAACTGGCAG ACTCCTTGCC GCTGGTTGGT GATCTAACGG ACGGCCTCGT GGATGGCCTG
TTCAACGGCT TCACCGACGG TCTCGAAGCT ATCCTCAACG GGTTTGAAGA CTGGCTCAAG
CAGATGATCT CAGTGGCACT GAAAAACGAG ATCGTCGTTC CGTTCATGGC CGCGTTCAGC
GGTGGCGGGG CCGTGGCCGG TGGGGTCGCT CAGGCCGCGG CCGGTGGCGG TAGTGGCCTG
CTTGGCAACG TCCTCGGTTT GGGCAGTGGT GGTGCATTTA GCGGTGCAGT GAGTGGAATT
TCCTCGGGCC TTGGCGGCGT GCTATCAGGT GGTGGCCTTG GGTCCAGTTT TGCGAACCTG
GGTGGTCTGG TGACCGGTTC TGTGGGCGGC TGGGGCGCAG TGGGCGCGGC GCTGCCCGCT
CTGGGCGCTG TTGCCGCAGC GGTGAGCTTC TTCACCACCA AAACCAAGCA CTTGGATAAC
GGCCTTCGCG TGACCGCCGA TAATATGGGC ACCTTGGTTG AAGAGTTCGA CAAGGTGCAG
AAGTCCCGCT TCTGGGGGCT CTCCAAAAAG GTCAGCCTCA CCTTTGAGGA GGCCGATGAG
GCTACGGCTG CGCCCATCCG CAAGTCCATT GAAGACATCA CCACCTCGAT TGGGGCTGCC
GGTGCGCGGC TTGGTCTCAC CGCTGATAAT TTCTCCAGCT GGTCCACGCA GATCCAGGTC
AGCCTCAAGG GGCTGGATGA GGCGGCGCGC AATGCTGAGA TCCAGCGCAT CTTCGATACC
GTCGCCGATC AGTTCTCCTA CGCGGCATTG GGGTCGTTCA ATGAGGCCAT GGGTGGCAGG
CTAATCCGCG AAGGCGAAGA CGCCGCTGCC ACGCTGGATG CGCTTGTTTC CTCGATCACC
TCGGCCAATC AGGCCATGGA CCTGCTCAAT GGGGCGATGT TTGAGACTTC GGTCTACGGC
GCAGACTTGG CGCGGCAACT GATCGATGCA GCGGGTGGCC TTGATACCTT CAATGCTTCG
GTCAACAGCT ACTTCACCAA CTTCTATTCA CAGGAAGAGC TGCTGACATC GCGCACAGGC
TTGCTGGCCG ATCAATTCGA GGCCTTGAAT GTCGCCATGC CGGCCACCAA AGAGGCCTTC
CGCGATCTGG TCGAGGCGCA GGATCTCAGC ACAGAAGAGG GCAGGGCGCT ATATGCTGGT
TTGCTTAACC TGTCCGGTGA GTTCGCCAAT CTGAGCCAGC TTTCGGAAGA GCTGTATGGC
TCTGCTTCGC TTGCTGCCAG CGGCATCTCT GCACTGGTGC GCTCCTTCTC CAGTGACGTC
TTGGGGGCGG AGGATGAACT CGCTGATGCG CAGGCCACAG CACTGGTCGA GTACAACAAC
GTGATGCGGA TCATGGATCT GCAGATCCGA TCGGCACAAA GCGCGCGTGA CTCGATCAAA
GGCATCTTCG ATATCCTCTC GGATGGGCTG GGCGCCCGCA CACCGCTTGA GCGTGAGGCG
CAGCGCCTGC AGCGCGAACG GCTGAAGGCG GAGCTTTCTG CCGGCATCGA TGACCCACAG
CGGCTGAGAG AGGTCGTGCA GGGCTTGAAC GCGCCGGCAG AGCAGTTCTT CAGCACATAC
GCGGACTTCG CCTATGATTA CGCCAGAACA AGCGCCCTCA TGGATGAGCA GAAGGGAATC
GCAGAGGAAC AGCTCACAGA GGCAGAGCAG CAACTCCGCG CACTGGAAAA CCAGAAGCGC
GCGATCGAGG AACTCTATGG GCCACTGCTC GGGATCGACC AGAACACCGA CAACCTGGAA
GAGGCCATGG AGCGCTTGGA GACTGCCATG CTTGGCGTCG AGGCTGCCAT GCTGCGGGTC
GAGGACTCGA TGTATGCGCT TGCTCAGGCC CTGCTCTCTG CAGTCTCGGG CATCGGGGGT
ACGGGCGGAC TGATGGGGAT GGGGCCGGAC GCCTTCGACC AGTTAAGCTT TGACCGCACC
AATGGCATTC TGAGCGAGAA AGGCGCGGGC GTGCTTGACG GCGTAGCCGC GCAGATCAAC
GGCCTTTACC AAGACGTCTT TGGCCGGAAT GTCGATGTGG CTGGCTTGGA CTTCTACGGC
GACCTTCTGC AATCCGGACA GGTCAAGGCT GGCCGCATCC AGTACGATCT GATGACCTCG
GGCGAGGCTC GGACGGGGGT GACACCGGGC TTTGGCAACA TCGGCTCTGC AGCGCAGCCT
GTCGATCCGG TTGAGGCACT GTATGGCTCT ATGCTGGGCC GTGCGGCAGA TCCAGCGGGT
GTCGAATTCT GGAAGTCTAC GGGCCTGCAG GGCGAGGCGC TTATCAACGC ATTCCGAGAT
GGGGCGCTGG CCGCTGGAGA CACTCCCAGC TTTGATGGTG GTGGTTACAC CGGCAGCGGA
CCGCGTGTTG GCGGCCTTGA TGGAAAGGGC GGCTTCCTCG CAATGCTGCA TCCTCGTGAG
ACAGTTATCG ATCACACGCG CACCAACCGT TCGGGTGGCC AAGCCGAGGG GGATAGCAGC
GCAGTGGTTC AGGAATTGCG CAAGATCGGT GATCGGCTGG CAGTTCTGGA ATCCCATGCG
CGCGCAACGA CTTACAACAC AGGCAAGTCG ATGCGAACGC ACACCAAATG GGACAGAGAT
GGTGTGCCGA AGGAGCGGAC TTAA
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| Protein sequence | MSVIPVGALH AEASMETASF EAGSARARKA LGYLRGGFEE TSRDALRHAE GMARSWDDGF
KKAASAAQKQ IDALTGVERA SNSASASAKL WAGQLDRQAK SFDRLRSTLD PVYASSKRYE
AAVQQAENAV RSGIVTQQEA NRVMQLAEQR YLGTSSAADK ASTPTRGFLG LFSKERSHDL
RQIGLQLSQV GQQGSVTGDY LGAAAIQAAD IGAMFGIAGI AAGTLISVLG PMAVGLLEVG
DASREMEEQS RLNSEAMGEL VGALDDYTLY ADAARRGTLE LIEEFGIFAA DVKETYEYLS
GVSIKRALDG LQTENFDLFA NLSDAASAIS AMEDALAALE RNKSIGATSE QIQTFKENFE
ALEEDAYVAA QAVGLMPEEI RAIKAGFDEL RGAQALEDIQ RESKEALDII REFYPEGQKL
PSALTDAVVQ LEAIITASSR AVSDTEEATS QTIRWADAMM GVNSEIQAIM SSLSAIGGGM
LSNAAKFVEI EALQSGKSIK AARQEAELFN RETDWNARSQ GANVFELMAI EAERWVFRSG
QAADIMLDKE REAARERERA LNKVSSASGK STKALENELK ALKASLDPME AYRQELEKLA
RFQGVLSEDE MARAMRNLNV ELADSLPLVG DLTDGLVDGL FNGFTDGLEA ILNGFEDWLK
QMISVALKNE IVVPFMAAFS GGGAVAGGVA QAAAGGGSGL LGNVLGLGSG GAFSGAVSGI
SSGLGGVLSG GGLGSSFANL GGLVTGSVGG WGAVGAALPA LGAVAAAVSF FTTKTKHLDN
GLRVTADNMG TLVEEFDKVQ KSRFWGLSKK VSLTFEEADE ATAAPIRKSI EDITTSIGAA
GARLGLTADN FSSWSTQIQV SLKGLDEAAR NAEIQRIFDT VADQFSYAAL GSFNEAMGGR
LIREGEDAAA TLDALVSSIT SANQAMDLLN GAMFETSVYG ADLARQLIDA AGGLDTFNAS
VNSYFTNFYS QEELLTSRTG LLADQFEALN VAMPATKEAF RDLVEAQDLS TEEGRALYAG
LLNLSGEFAN LSQLSEELYG SASLAASGIS ALVRSFSSDV LGAEDELADA QATALVEYNN
VMRIMDLQIR SAQSARDSIK GIFDILSDGL GARTPLEREA QRLQRERLKA ELSAGIDDPQ
RLREVVQGLN APAEQFFSTY ADFAYDYART SALMDEQKGI AEEQLTEAEQ QLRALENQKR
AIEELYGPLL GIDQNTDNLE EAMERLETAM LGVEAAMLRV EDSMYALAQA LLSAVSGIGG
TGGLMGMGPD AFDQLSFDRT NGILSEKGAG VLDGVAAQIN GLYQDVFGRN VDVAGLDFYG
DLLQSGQVKA GRIQYDLMTS GEARTGVTPG FGNIGSAAQP VDPVEALYGS MLGRAADPAG
VEFWKSTGLQ GEALINAFRD GALAAGDTPS FDGGGYTGSG PRVGGLDGKG GFLAMLHPRE
TVIDHTRTNR SGGQAEGDSS AVVQELRKIG DRLAVLESHA RATTYNTGKS MRTHTKWDRD
GVPKERT
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