12 homologs were found in PanDaTox collection
for query gene TM1040_1657 on replicon NC_008044
Organism: Ruegeria sp. TM1040



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008044  TM1040_0819  tape measure domain-containing protein  93.54 
 
 		 1451 aa  1508    Ruegeria sp. TM1040  Bacteria  normal  0.060992  normal  0.0141632 
 
 
-
 
NC_008044  TM1040_1611  hypothetical protein  97.74 
 
 		 1507 aa  2751    Ruegeria sp. TM1040  Bacteria  normal  0.405784  normal  1 
 
 
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NC_008044  TM1040_1657  hypothetical protein  100 
 
 		 1508 aa  2998    Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007494  RSP_3791  hypothetical protein  29.06 
 
 		 1724 aa  180  2e-43  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009050  Rsph17029_3368  hypothetical protein  30.49 
 
 		 1724 aa  172  3e-41  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007493  RSP_2059  phage tail tape measure protein  32.2 
 
 		 1673 aa  152  6e-35  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
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NC_009050  Rsph17029_3328  hypothetical protein  31.9 
 
 		 1632 aa  136  3e-30  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  0.053568 
 
 
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NC_007493  RSP_1636  lambda family phage tail tape measure protein  31.57 
 
 		 1668 aa  132  5.0000000000000004e-29  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008752  Aave_1628  prophage tail length tape measure  23.86 
 
 		 1906 aa  105  8e-21  Acidovorax citrulli AAC00-1  Bacteria  normal  0.937522  normal  0.73173 
 
 
-
 
NC_008752  Aave_1782  prophage tail length tape measure  25.25 
 
 		 1835 aa  103  2e-20  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008687  Pden_3596  phage tape measure protein  78.95 
 
 		 632 aa  72.4  0.00000000006  Paracoccus denitrificans PD1222  Bacteria  normal  0.0625908  normal  1 
 
 
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NC_010681  Bphyt_1180  Prophage tail length tape measure  25.99 
 
 		 1707 aa  62  0.00000009  Burkholderia phytofirmans PsJN  Bacteria  normal  0.537045  normal  1 
 
 
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