| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1657 |
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| Symbol | |
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| ID | 4075760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1757916 |
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| End bp | 1762442 |
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| Gene Length | 4527 bp |
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| Protein Length | 1508 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006970 |
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| Product | hypothetical protein |
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| Protein accession | YP_613652 |
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| Protein GI | 99081498 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCAA TCCCAGTTGG CGCCCTGCGC GCCGAAGCAT CGTTGGAAAC CGCCTCTTTT
GAGGCCGGTA GTGCTCGGGC GCGCAAGGCA CTTGGTTATC TGCGTACTGG TTTCGAAGAG
ACCAGCCGAG ATGCATTGCG TCACGCCGAA GGGATGGCGC GGTCTTGGGA TGATGGTTTC
AAGAAAGCAG CTTCTGCGGC ACAGAAGCAA ATCGATGCGC TGACAGGTGT GGAGCGGGCG
TCCAACTCGG CTTCGGCTTC TGCAAAGCTG TGGGCAGGGC AATTAGATCG GCAAGCCAAA
TCCTTTGATC GGCTGCGCTC AACGCTCGAT CCTGTCTACG CCTCATCCAA GCGATATGAG
GCTGCGGTAG AGCAGGCTGA AAACGCTGTG CGTTCCGGCC TTGTCACGCA GCAAGAAGCA
AACCGCGTGC TGCAGCTGGC AGAGCAGCGA TATTTGGGCA CGTCGTCAGC GGCCGATAAG
GCTTCCACGC CAACGAGAGG CTTTCTTGGG CTGTTTTCCA AGGAACGAAG CCATGATCTG
AGGCAGATTG GCCTTCAGCT GAGCCAGGTG GGCCAACAAG GATCTGTTAC TGGTGACTAT
CTCGGAGCCG CAGCAATTCA GGCTGCCGAT ATTGGCGCCA TGTTCGGTAT TGCCGGTATT
GCAGCCGGTA CCCTGATCAG CGTGCTGGGG CCAATGGCTG TTGGGCTACT CGAGGTAGGT
GATGCTTCAA GGGAAATGGA GGAACAGTCT CGCCTGAATT CTGAAGCGAT GGGCGAGCTT
GTTGGGGCGC TCGACGATTA CACGCTGTAT GCTGACGCCG CGCGTCGTGG AACTCTGGAG
CTAATAGAAG AGTTTGGCAT CTTTGCTGAG GACGTCAAAG AGACCTACGA GTATCTCTCT
GGGGTCTCGA TAAAGCGCGC ACTGGATGGT TTGCAAACTG AGAACTTTGA TCTTTTTGCG
AACCTGAGTG ATGCTGCATC TGCCATTTCT GCCATGGAAG ATGCACTTGC CGCGTTGGAG
CGAAACAAGT CGATCGGAGC CACCTCTGAA CAGATCCAAA CATTCAAGGA GAACTTCGAG
GCACTTGAAG AGGATGCTTA TGTAGCCGCT CAAGCCGTCG GGCTCATGCC CGAAGAAATT
CGCGCTATCA AGGCAGGCTT TGACGAGCTT CGTGGAGCAC AAGCGCTTGA GGACATCCAA
AGAGAGTCCA AAGAAGCCCT AGATATCATT CGAGAGTTCT ACCCTGAGGG ACAAAAGCTG
CCTTCAGCTT TGACAGATGC AGTAGTTCAG CTGGAGGCCA TCATTACGGC ATCTAGCAGG
GCTGTGTCCG ACACCGAGGA GGCCACCTCT CAGACGATAC GCTGGGCCGA CGCCATGATG
GGTGTCAACT CTGAGATCCA AGCGATCATG TCGTCACTGT CTGCAATCGG CGGCGGCATG
CTCTCTAACG CGGCGAAATT CGTGGAAATC GAAGCGCTGC AAGCCGGTAA GTCGATCAAG
GCAGCGCGCC AAGAGGCCGA GCTATTCAAT CGAGAGACCG ATTGGAACGC CCGCTCGCAA
GGTGCGAATG TTTTTGAGCT GATGGCGATT GAGGCAGAGA GATGGGTTTT CCGCTCGGGA
CAGGCTGCGG ATATCATGCT GGATAAAGAG CGCGAAGCCG CTCGCGAGAG AGAGCGTGCA
CTGAACAAGG TGTCCTCTGC CAGCGGCAAG TCCACCAAGG CGCTTGAAAA CGAGCTTAAG
GCTCTCAAAG CATCTCTCGA CCCAATGGAG GCTTATCGGC AAGAGCTGGA AAAACTGGCT
AAGTTCCAAG GTATTTTGTC CGAGGATGAA ATGGCGCGTG CGATGCGCGA TCTGAATGTC
GAACTGGCCG ACTCATTGCC GCTTGTCGGT GATCTGACAG ACGGCCTCGT GGATGGCCTT
TTCAACGGCT TCACCGACGG TCTCGACGGC ATCTTGGATA CCTTCGAGAA CTGGCTCAAG
CAGATGATCT CGGTGGCACT GAAAAACGAG ATCGTCGTTC CGTTCATGGC CGCGTTCAGC
GGTGGCGGAG CCGTGGCCGG TGGGGTCGCC CAGGCCGCAG CCGGGGGCGG TAGTGGCCTG
CTTGGCAACG TCCTTGGACT GGGCAGTGGT GGTGCGTTCA GCGGTGCTGT GAGTGGAATT
TCCTCGGGCC TTGGCGGCGT GCTGTCAGGT GGTGGCCTTG GGTCCAGTTT TGCGAACCTG
GGTGGTCTGG TGACCGGTTC GGTGGGCGGC TGGGGCGCAG TAGGCGCGGC GCTACCCGCT
CTGGGCGCTG TTGCTGCAGC GGTGAGCTTC TTCACCACCA AAACCAAGCA CTTGGATAAC
GGCCTTCGCG TGACCGCCGA TAATATGGGC ACCTTGGTTG AAGAGTTCGA CAAGGTGCAG
AAGTCCCGCT TCTGGGGGCT CTCCAAAAAG GTCAGCCTCA CCTTTGAGGA GGCAGATGAG
GCTACGGCTG CGCCCATCCG CAAGTCCATT GAAGACATCA CCACCTCAAT TGGCGCTGCC
GGTGCGCAGC TTGGTCTCAC TGCTGATAAT TTCTCAAGCT GGTCCACGCA GATCCAGGTC
AGCCTCAAGG GGCTGGATGA GGCGGCGCGC AATGCTGAGA TCCAGCGCAT CTTCGATACC
GTCGCCGATC AGTTCTCCTA CGCGGCATTG GGGTCGTTCA ATGAGGCCAT GGGTGGCAGG
CTGATCCGCG AAGGCGAAGA CGCCGCGGCC ACGCTGGATG CGCTTGTGTC CTCGATCACC
TCGGCCAATC AGGCCATGGA ACTGCTCAAT GGGGCGATGT TTGAGACCTC GGTCTACGGC
GCAGATATGG CGCGGCAACT GATCGATGCA GCCGGTGGCC TTGATACCTT CAATGCATCT
GTGAACAGCT ACTTCACCAA CTTCTATAGC CAAGAAGAGC AGCTGACATC GCGCACAGGC
TTGTTGGCAG ATCAATTCGA GGCCTTGAAT GTCGCCATGC CGGCCACCAA AGAGGCCTTC
CGCGATCTGG TCGAGGCGCA GGATCTCAGC ACAGAAGAGG GCAGGGTGCT TTATGCAGGT
TTGCTTAACC TGTCCGGTGA GTTCGCCAAT CTGAGCCAGC TTTCGGAAGA GCTGTATGGC
TCTGCTTCGC TTGCTGCCAG CGGCATCTCT GCGCTGGTGC GCTCCTTCTC CAGTGACGTC
TTGGGGGCGG AGGATGAACT CGCTGATGCG CAGGCCACAG CACTGGTCGA GTACAACAAC
GTTATGCGGA TCATGGATCT GCAGATCCGA TCGGCACAAA GCGCGCGTGA CTCGATCAAA
GGCATCTTCG ATATCCTCTC GGATGGGCTG GGCGCCCGCA CACCGCTTGA GCTTGAGGCG
CAGCGCCTGC AGCGCGAACG GCTGAAGACG GAGCTTTCTG CCGGGATCGA TGACCCACAG
CGGCTGAGAG AGGTCGTGCA GGGCTTGAAC GCGCCCGCAG AGCAGTTCTT CAGCACATAC
GCGGACTTCG CCTATGATTA CGCCAGAACA AGCGCCCTCA TGGATGAGCA GAAGGGCATC
GCAGAGGAAC AGCTCACAGA GGCAGAGCAG CAACTCCGGG TACTGGAGAA CCAGAAGCGC
GCGATCGAGG AACTCTATGG GCCACTGCTC GGGATAGACC AGAACACCGA CAACCTGGAA
GAGGCCATGG AGCGCTTGGA GACCGCCATG CTTGGCGTCG AGGCTGCCAT GCTGCGTGTC
GAGGACTCGA TGTATGCGCT TGCTCAGGCC CTGCTCTCCG CAGTCTCGGG CATCGGGGGT
ACGGGCGGGC TGATGGGCCT GGGCCGGGAC GCCTTCGACC AGTTCAGCTT TGACCGCACC
AATGGCATTC TGAGCGAGAA AGGCGCGGGA GTGCTTGACG GCGTTGCCGC GCAGATCAAC
GGCCTTTACC AAGATGTCTT TGGCCGAAAT GTCGATGTGT CTGGCTTGGA CTTTTACGGC
GACCTTCTGC AATCCGGACA GGTCAAGGCG GGCCGCATCC AGTACGATCT GATGACCTCG
GGCGAGGCCC AGACGGGGGT GACACCGGGC TTTGGCAACA TCGGCTCTGC AGCGCAGCCT
GTTGATCCGG TTGAGGCACT GTATGGCTCG ATGCTGGGCC GCGCGGCAGA TCCAGCGGGT
GTCGAATTCT GGAAGTCTAC AGGCCTGCAG GGCGAGGCGC TTATCAACGC CTTCCGAGAT
GGGGCGCTGG CCGCTGGAGA CACTCCCAGC TTCGATGGTG GTGGTTACAC CGGCAGCGGA
CCGCGTGTTG GCGGTATCGA TGGAAAGGGC GGCTTCCTCG CAATGCTGCA TCCTCGTGAG
ACAGTTATCG ATCACACGCG CACCAACCGT TCGGGTGGCC AAGCCGAGGG GGATAGCAGC
GCAGTGGTTC AGGAATTGCG GAAAATCGGT GAACGGCTGG CGGTGCTGGA ATCCCATGCG
CGCGCAACGA CTTACAACAC GGGCAAGGCG ATGCGGACGC AGACCAAATG GGACAGAGAC
GGTGTTCCGA AGGAGCGAAC CGAATGA
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| Protein sequence | MSAIPVGALR AEASLETASF EAGSARARKA LGYLRTGFEE TSRDALRHAE GMARSWDDGF
KKAASAAQKQ IDALTGVERA SNSASASAKL WAGQLDRQAK SFDRLRSTLD PVYASSKRYE
AAVEQAENAV RSGLVTQQEA NRVLQLAEQR YLGTSSAADK ASTPTRGFLG LFSKERSHDL
RQIGLQLSQV GQQGSVTGDY LGAAAIQAAD IGAMFGIAGI AAGTLISVLG PMAVGLLEVG
DASREMEEQS RLNSEAMGEL VGALDDYTLY ADAARRGTLE LIEEFGIFAE DVKETYEYLS
GVSIKRALDG LQTENFDLFA NLSDAASAIS AMEDALAALE RNKSIGATSE QIQTFKENFE
ALEEDAYVAA QAVGLMPEEI RAIKAGFDEL RGAQALEDIQ RESKEALDII REFYPEGQKL
PSALTDAVVQ LEAIITASSR AVSDTEEATS QTIRWADAMM GVNSEIQAIM SSLSAIGGGM
LSNAAKFVEI EALQAGKSIK AARQEAELFN RETDWNARSQ GANVFELMAI EAERWVFRSG
QAADIMLDKE REAARERERA LNKVSSASGK STKALENELK ALKASLDPME AYRQELEKLA
KFQGILSEDE MARAMRDLNV ELADSLPLVG DLTDGLVDGL FNGFTDGLDG ILDTFENWLK
QMISVALKNE IVVPFMAAFS GGGAVAGGVA QAAAGGGSGL LGNVLGLGSG GAFSGAVSGI
SSGLGGVLSG GGLGSSFANL GGLVTGSVGG WGAVGAALPA LGAVAAAVSF FTTKTKHLDN
GLRVTADNMG TLVEEFDKVQ KSRFWGLSKK VSLTFEEADE ATAAPIRKSI EDITTSIGAA
GAQLGLTADN FSSWSTQIQV SLKGLDEAAR NAEIQRIFDT VADQFSYAAL GSFNEAMGGR
LIREGEDAAA TLDALVSSIT SANQAMELLN GAMFETSVYG ADMARQLIDA AGGLDTFNAS
VNSYFTNFYS QEEQLTSRTG LLADQFEALN VAMPATKEAF RDLVEAQDLS TEEGRVLYAG
LLNLSGEFAN LSQLSEELYG SASLAASGIS ALVRSFSSDV LGAEDELADA QATALVEYNN
VMRIMDLQIR SAQSARDSIK GIFDILSDGL GARTPLELEA QRLQRERLKT ELSAGIDDPQ
RLREVVQGLN APAEQFFSTY ADFAYDYART SALMDEQKGI AEEQLTEAEQ QLRVLENQKR
AIEELYGPLL GIDQNTDNLE EAMERLETAM LGVEAAMLRV EDSMYALAQA LLSAVSGIGG
TGGLMGLGRD AFDQFSFDRT NGILSEKGAG VLDGVAAQIN GLYQDVFGRN VDVSGLDFYG
DLLQSGQVKA GRIQYDLMTS GEAQTGVTPG FGNIGSAAQP VDPVEALYGS MLGRAADPAG
VEFWKSTGLQ GEALINAFRD GALAAGDTPS FDGGGYTGSG PRVGGIDGKG GFLAMLHPRE
TVIDHTRTNR SGGQAEGDSS AVVQELRKIG ERLAVLESHA RATTYNTGKA MRTQTKWDRD
GVPKERTE
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