11 homologs were found in PanDaTox collection
for query gene Swoo_0603 on replicon NC_010506
Organism: Shewanella woodyi ATCC 51908



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010506  Swoo_0603  peptidase A24A prepilin type IV  100 
 
 		 164 aa  315  1e-85  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009784  VIBHAR_06198  prepilin peptidase CpaA  40.74 
 
 		 112 aa  64.7  0.0000000005  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011313  VSAL_II0367  type IV leader peptidase  32.79 
 
 		 144 aa  57.4  0.00000007  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0321504  n/a   
 
 
-
 
NC_009783  VIBHAR_03359  prepilin peptidase CpaA  36.17 
 
 		 147 aa  57.4  0.00000009  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009511  Swit_4870  peptidase A24A, prepilin type IV  37.4 
 
 		 157 aa  55.1  0.0000004  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007794  Saro_1526  peptidase A24A, prepilin type IV  34.51 
 
 		 157 aa  54.3  0.0000007  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_3004  peptidase A24A prepilin type IV  28.77 
 
 		 151 aa  47.4  0.00009  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009485  BBta_7029  putative type IV prepilin peptidase, cpaA  29.8 
 
 		 174 aa  46.6  0.0002  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.406148  normal  0.765009 
 
 
-
 
NC_009708  YpsIP31758_0603  type IV prepilin peptidase family protein  31.11 
 
 		 132 aa  44.7  0.0005  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.258479  n/a   
 
 
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NC_007973  Rmet_0650  peptidase A24A, prepilin type IV  28.77 
 
 		 167 aa  41.2  0.007  Cupriavidus metallidurans CH34  Bacteria  normal  0.976184  normal  0.159004 
 
 
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NC_010172  Mext_2478  peptidase A24A prepilin type IV  29.55 
 
 		 169 aa  40.8  0.008  Methylobacterium extorquens PA1  Bacteria  normal  0.453378  normal  1 
 
 
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