Gene YpsIP31758_0603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0603 
Symbol 
ID5385278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp707636 
End bp708034 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content37% 
IMG OID640863575 
Producttype IV prepilin peptidase family protein 
Protein accessionYP_001399596 
Protein GI153949206 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4960] Flp pilus assembly protein, protease CpaA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.258479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTATTAA TCGTCTCTCA GCTATTATTT GTTTGTTACA GTGACATCCG CCACAGAATA 
ATAAGCAATA AGTTTGTTAT TAGCATTGCA TTCAACGCCA TTATATTGAT CCTGGTAACA 
CATCATACTG TTAGTATCAT TATTCCTATT GTCGCACTAT TTTTCGGCTA TATTATTTTT 
CATTTCAACG TGATGGGAGG CGGCGATGTA AAATTGATCA CAGTACTCCT TCTGGCACTG 
ACGGCAGAAC AGTCATTAAA TTTTATAATC TACACAGCGA TCATGGGCGG AGTTGTTATG 
TTAGTAGGTT TATTAATCAA TCGCGCTGAT ATCCAAAAAC GCGGGATTCC CTACGCCATT 
GCTATCACTG CTGGATTTCT ATTATCTGTA TTAATTTAA
 
Protein sequence
MVLIVSQLLF VCYSDIRHRI ISNKFVISIA FNAIILILVT HHTVSIIIPI VALFFGYIIF 
HFNVMGGGDV KLITVLLLAL TAEQSLNFII YTAIMGGVVM LVGLLINRAD IQKRGIPYAI 
AITAGFLLSV LI