Gene VIBHAR_03359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03359 
Symbol 
ID5553097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp3391635 
End bp3392078 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content41% 
IMG OID640908839 
Productprepilin peptidase CpaA 
Protein accessionYP_001446533 
Protein GI156975626 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4960] Flp pilus assembly protein, protease CpaA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGTTTG TATACATTAC GTTAGCAATA GTCTGTTTTG TTGTGTCGCT TTCTGATATC 
AGAGAGCGAA CCATTAAAAA CAGTCACGTG TTAGTGATTG CCGTTTTAGC GATTGCGATT 
GGCATTGCAG ATTTTTCATT ATCAAGTCTT TGGGTGATAG GTATTTGTTG GTCTGCTTTG 
CTTTTCCTCC ATGTACTTGG GGTACTTGGA GGGGGGGACG TAAAACTTAT TGCTGCTTTT 
TCTCTCTCAC TTCCAACTCA AAGCCTTTTA GAGGCATTGA TTTTCGTCGG GATATACGGA 
GGGATATTGG CAGTAATCTA CCTGATATTA CTACGACCAT CTCACGTTAC TGGAGAGGGT 
GACATACCTC AGATCGGGCT TCCCTACGGT GTTGCAATTT GTTGTGGATT TTATACGGCA 
CTTCTTTTGA AAACATCCGT TTAA
 
Protein sequence
MLFVYITLAI VCFVVSLSDI RERTIKNSHV LVIAVLAIAI GIADFSLSSL WVIGICWSAL 
LFLHVLGVLG GGDVKLIAAF SLSLPTQSLL EALIFVGIYG GILAVIYLIL LRPSHVTGEG 
DIPQIGLPYG VAICCGFYTA LLLKTSV