| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4870 |
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| Symbol | |
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| ID | 5197882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 5366124 |
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| End bp | 5366597 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640584427 |
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| Product | peptidase A24A, prepilin type IV |
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| Protein accession | YP_001265345 |
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| Protein GI | 148557763 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4960] Flp pilus assembly protein, protease CpaA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATTC AAATTCCCGA CCTGTTCGGC ATCCTGCTGG CGGTACTGCT GCTGATGGCG
GCGTGGACCG ACATCCGGAC GCGGACGATC TCCAACGAGC TCAACGCCGC GATCGCGCTG
CTGGCGATCG TCTTCTGGTG GATCGCGGGC GAGGCGCTAT GGCCCGACGT CGCGCTGCGG
ATCGGGGTGG CGCTCGCCAT CTTCGCGCTG TTCGCGGTGC TGTTCATGCT CCGCATGATG
GGCGGCGGCG ACGTCAAGAT GATCGGCGCG CTCGCGCTGT GGCTGCCGTT CCACGCGCTG
ATCGTGATGC TGACCGTCAT GGCGCTGGCT GGCGGCGCGA TCACGCTCGG CCTGCTGATC
CGGCAGCGCT GGCGGCCGAA CGCCGACCGG CCCGAGGTTC CCTATGGCGT CGCGATCGCG
ATCGGCGGGC TGTGGGTCAT CGCAAACGGC TTGTTAACCA CGCCCGTTGC ATAG
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| Protein sequence | MSIQIPDLFG ILLAVLLLMA AWTDIRTRTI SNELNAAIAL LAIVFWWIAG EALWPDVALR
IGVALAIFAL FAVLFMLRMM GGGDVKMIGA LALWLPFHAL IVMLTVMALA GGAITLGLLI
RQRWRPNADR PEVPYGVAIA IGGLWVIANG LLTTPVA
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