Gene A2cp1_3004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_3004 
Symbol 
ID7298220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand
Start bp3328411 
End bp3328866 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content75% 
IMG OID643595814 
Productpeptidase A24A prepilin type IV 
Protein accessionYP_002493405 
Protein GI220918101 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4960] Flp pilus assembly protein, protease CpaA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCCGTCG CGGCCGCCTC GGACCTGGCG TCGAGGCGCA TCCCGAACGC GCTCTCGCTG 
ACGGTTGCGG TCGCCGGCCT GGCCGCGAGC ACCGGTCCGC TGCAGGCCGC GTCCGGGCTG
GTGGCGTCGG CCATCTGCCT CGCACTGATG CTTCCGCTCT GGCGCCGCCG CGCGATAGGA
GGCGGTGACG TCAAGCTCCT CGCGGCGGCC GCCGCCTGGG TCCGGCTCGA GCACCTCTTC
GTGTTCGGCC TCGCTGTGGC GCTGTGCGGG GGCCTGCTGG CGCTGATCGT GCTCGCCAGG
GCGTCCGCGG CCGAACTTCG CCTCGTCCGC GCCAACGCGG TGGCCTCACT CGCGATGTCC
AGACCGGCCG TCGCGCGCTC CGCGGGCACC TCCATCCCGT ACGGCGTCGC GATCGCGCTC
GGCGCCGCGA TCGCGACCTC CGGAGCGCTC TCGTGA
 
Protein sequence
MAVAAASDLA SRRIPNALSL TVAVAGLAAS TGPLQAASGL VASAICLALM LPLWRRRAIG 
GGDVKLLAAA AAWVRLEHLF VFGLAVALCG GLLALIVLAR ASAAELRLVR ANAVASLAMS
RPAVARSAGT SIPYGVAIAL GAAIATSGAL S