19 homologs were found in PanDaTox collection
for query gene SO_2697 on replicon NC_004347
Organism: Shewanella oneidensis MR-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004347  SO_2697  hypothetical protein  100 
 
 
553 aa  1100    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009457  VC0395_A1388  hypothetical protein  67.55 
 
 
346 aa  468  9.999999999999999e-131  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007494  RSP_3355  putative tape measure protein  41.92 
 
 
775 aa  214  2.9999999999999995e-54  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_0680  hypothetical protein  39.1 
 
 
1308 aa  175  1.9999999999999998e-42  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009665  Shew185_2103  phage tape measure protein  41.7 
 
 
1307 aa  174  2.9999999999999996e-42  Shewanella baltica OS185  Bacteria  normal  0.56214  n/a   
 
 
-
 
NC_009997  Sbal195_2149  phage tape measure protein  41.3 
 
 
1308 aa  171  4e-41  Shewanella baltica OS195  Bacteria  normal  0.843593  normal 
 
 
-
 
NC_008345  Sfri_1684  phage tape measure protein  39.39 
 
 
1292 aa  160  7e-38  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0765  phage tail tape measure protein, TP901 family  33.33 
 
 
1306 aa  140  7.999999999999999e-32  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0789  phage tape measure protein  32.97 
 
 
1306 aa  139  1e-31  Shewanella baltica OS223  Bacteria  normal  normal  0.204936 
 
 
-
 
NC_009457  VC0395_A0746  phage tail tape measure family protein  46.67 
 
 
583 aa  122  9.999999999999999e-27  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0691  phage tail tape measure family protein  46.67 
 
 
583 aa  122  9.999999999999999e-27  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1385  hypothetical protein  35.59 
 
 
231 aa  98.2  4e-19  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010158  YpAngola_0089  putative phage tail tape measure protein  28.92 
 
 
1521 aa  86.7  0.000000000000001  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_4676  hypothetical protein  23.9 
 
 
1609 aa  60.1  0.0000001  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_1263  phage tape measure protein  23.94 
 
 
852 aa  53.5  0.000009  Thermoanaerobacter sp. X514  Bacteria  decreased coverage  0.00378287  n/a   
 
 
-
 
NC_011830  Dhaf_4807  phage tape measure protein  27.27 
 
 
694 aa  53.1  0.00001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_014149  Plim_4263  phage tape measure protein  24.12 
 
 
574 aa  48.9  0.0003  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_2826  hypothetical protein  27.75 
 
 
893 aa  47.4  0.0007  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2488  phage tape measure protein  25 
 
 
611 aa  43.9  0.008  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
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