22 homologs were found in PanDaTox collection
for query gene Rsph17025_3371 on replicon NC_009429
Organism: Rhodobacter sphaeroides ATCC 17025



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009429  Rsph17025_3371  hypothetical protein  100 
 
 		 102 aa  198  1.9999999999999998e-50  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.677522  normal  0.937516 
 
 
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NC_009049  Rsph17029_2151  hydrogenase expression/formation protein (HUPF/HYPC)  75.24 
 
 		 105 aa  134  3.0000000000000003e-31  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.188012  normal  0.193487 
 
 
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NC_007493  RSP_0500  putative HupF/HypC hydrogenase protein  75.24 
 
 		 105 aa  134  4e-31  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
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NC_008687  Pden_3102  hydrogenase expression/formation protein (HUPF/HYPC)  67.96 
 
 		 103 aa  111  4.0000000000000004e-24  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  1 
 
 
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NC_009720  Xaut_2177  hydrogenase assembly chaperone hypC/hupF  48.62 
 
 		 110 aa  79.7  0.00000000000001  Xanthobacter autotrophicus Py2  Bacteria  normal  0.0242172  normal  0.179012 
 
 
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NC_012560  Avin_50550  hydrogenase assembly chaperone HoxL (HypC/HupF family)  50.98 
 
 		 106 aa  75.9  0.0000000000002  Azotobacter vinelandii DJ  Bacteria  hitchhiker  0.00348713  n/a   
 
 
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NC_010627  Bphy_7261  hydrogenase assembly chaperone hypC/hupF  48.98 
 
 		 102 aa  66.2  0.0000000001  Burkholderia phymatum STM815  Bacteria  normal  0.409873  normal  0.408688 
 
 
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NC_010581  Bind_1154  hydrogenase assembly chaperone hypC/hupF  45.22 
 
 		 112 aa  60.5  0.000000009  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.583061  normal  1 
 
 
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NC_007643  Rru_A1165  hydrogenase expression/formation protein (HUPF/HYPC)  44.21 
 
 		 123 aa  60.1  0.00000001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.297404  n/a   
 
 
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NC_007958  RPD_1167  hydrogenase assembly chaperone hypC/hupF  37.11 
 
 		 100 aa  50.8  0.000006  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
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NC_007925  RPC_3768  hydrogenase assembly chaperone hypC/hupF  34.91 
 
 		 104 aa  46.2  0.0001  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
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NC_008340  Mlg_2025  hydrogenase assembly chaperone hypC/hupF  39.05 
 
 		 128 aa  45.8  0.0002  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.306695  normal  1 
 
 
-
 
NC_011004  Rpal_1159  hydrogenase assembly chaperone hypC/hupF  35.42 
 
 		 100 aa  45.1  0.0003  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.16504  n/a   
 
 
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NC_007298  Daro_3985  hydrogenase expression/formation protein (HUPF/HYPC)  44 
 
 		 100 aa  44.7  0.0004  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007298  Daro_3969  hydrogenase expression/formation protein (HUPF/HYPC)  35.11 
 
 		 96 aa  42.7  0.002  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
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NC_011149  SeAg_B1636  hydrogenase assembly chaperone HypC/HupF  35.71 
 
 		 99 aa  42.7  0.002  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.668575  n/a   
 
 
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NC_009485  BBta_2000  hydrogenase expression/formation  34.38 
 
 		 96 aa  42.4  0.002  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.125343  normal  1 
 
 
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NC_007973  Rmet_1292  hydrogenase assembly chaperone HypC/HupF  34.65 
 
 		 100 aa  42.4  0.002  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.000883149  normal  0.714979 
 
 
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NC_008781  Pnap_1970  hydrogenase assembly chaperone hypC/hupF  34.88 
 
 		 108 aa  42  0.003  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
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NC_011094  SeSA_A1639  hydrogenase assembly chaperone HypC/HupF  35.71 
 
 		 99 aa  41.6  0.003  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  normal  1 
 
 
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NC_002936  DET1433  hydrogenase assembly chaperone HypC/HupF  47.17 
 
 		 71 aa  42  0.003  Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
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NC_013204  Elen_0141  hydrogenase assembly chaperone hypC/hupF  37.65 
 
 		 85 aa  40.4  0.008  Eggerthella lenta DSM 2243  Bacteria  normal  1  normal  1 
 
 
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