Gene RPD_1167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1167 
Symbol 
ID4021643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1327588 
End bp1327890 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content69% 
IMG OID637961359 
Producthydrogenase assembly chaperone hypC/hupF 
Protein accessionYP_568306 
Protein GI91975647 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0298] Hydrogenase maturation factor 
TIGRFAM ID[TIGR00074] hydrogenase assembly chaperone HypC/HupF 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGTCG GCCTGCCGAT GACCGTGATC AGCAGCGACG GCGCGACCGC TTTGTGCGAG 
CGCCGCGCCG AGCAGCGGCG GGTCTCGACT GCGCTGGTCG GCGAGGTCGC GGTCGGCGAT
CAGGTGCTGG TGTTCATCGA CAGCGCGGTC CGCCGGCTCG ATCCGGAGGA GGCGCGGCAG
ATCGACGATG CGCTGGACGG CCTCGTCGCC GCGATGGAGG GGCGTCCGTT CGAACATCTG
TTCGCCGATC TGATCGATCG CGAGCCGGAG TTGCCGGATC ATCTGCGAAC CGAGCGGCAC
TGA
 
Protein sequence
MCVGLPMTVI SSDGATALCE RRAEQRRVST ALVGEVAVGD QVLVFIDSAV RRLDPEEARQ 
IDDALDGLVA AMEGRPFEHL FADLIDREPE LPDHLRTERH