Gene BBta_2000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2000 
SymbolhupF 
ID5152111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2067560 
End bp2067850 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content66% 
IMG OID640556941 
Producthydrogenase expression/formation 
Protein accessionYP_001238097 
Protein GI148253512 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0298] Hydrogenase maturation factor 
TIGRFAM ID[TIGR00074] hydrogenase assembly chaperone HypC/HupF 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.125343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCTGG GCCTGCCGAT GACGATCGTA GAGACCGATG GCGTCACGGC GCTGTGCAGC 
TTCGACGGTG AGGAACGCCG CGTCTCGGTG CTGCTGCTGT CGGATCCGCC GGTCGGCGCC
AAGGTCCTCG TCTATCTCGA CAACGCCGTC CGTCTGCTCG ACGACGAGGA GGCGCGGCTC
ATTGCCGACG CGCTGCGCGG ACTGCATGCC GCGATGAACG GCGAGAATTG CGACGACTTC
TTTGCCGATC TGATCGGCCG CGAGCCGCAG CTGCCCGACC ATCTGCGCTG A
 
Protein sequence
MCLGLPMTIV ETDGVTALCS FDGEERRVSV LLLSDPPVGA KVLVYLDNAV RLLDDEEARL 
IADALRGLHA AMNGENCDDF FADLIGREPQ LPDHLR