21 homologs were found in PanDaTox collection
for query gene RoseRS_4370 on replicon NC_009523
Organism: Roseiflexus sp. RS-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009523  RoseRS_4370    100 
 
 
135 bp  268  2.9999999999999995e-70  Roseiflexus sp. RS-1  Bacteria  normal  0.0256562  normal  0.563616 
 
 
-
 
NC_009523  RoseRS_4034  transposase, IS4 family protein  90.48 
 
 
826 bp  155  2.9999999999999998e-36  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.000467614  normal 
 
 
-
 
NC_009523  RoseRS_1220    90.48 
 
 
1955 bp  155  2.9999999999999998e-36  Roseiflexus sp. RS-1  Bacteria  decreased coverage  0.0000904356  normal  0.888185 
 
 
-
 
NC_009523  RoseRS_1756  transposase, IS4 family protein  90.48 
 
 
826 bp  155  2.9999999999999998e-36  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.000000595151  normal  0.154833 
 
 
-
 
NC_009523  RoseRS_0241  transposase, IS4 family protein  89.68 
 
 
826 bp  147  8.000000000000001e-34  Roseiflexus sp. RS-1  Bacteria  normal  0.458028  normal  0.0118803 
 
 
-
 
NC_009523  RoseRS_1933    89.68 
 
 
348 bp  147  8.000000000000001e-34  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.033181 
 
 
-
 
NC_009523  RoseRS_1764  transposase, IS4 family protein  89.68 
 
 
826 bp  147  8.000000000000001e-34  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.456198 
 
 
-
 
NC_009523  RoseRS_1808  transposase, IS4 family protein  88.89 
 
 
826 bp  139  2e-31  Roseiflexus sp. RS-1  Bacteria  normal  0.20953  normal  0.0264581 
 
 
-
 
NC_009523  RoseRS_4297    88.1 
 
 
825 bp  131  5.0000000000000004e-29  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.990793 
 
 
-
 
NC_009523  RoseRS_2130  transposase, IS4 family protein  88.14 
 
 
826 bp  123  9.999999999999999e-27  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_0891    88.03 
 
 
807 bp  121  4.9999999999999996e-26  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.000765218  unclonable  0.0000148237 
 
 
-
 
NC_009523  RoseRS_1437    86.51 
 
 
808 bp  115  3e-24  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0303465 
 
 
-
 
NC_009523  RoseRS_2051    86.51 
 
 
827 bp  115  3e-24  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.294544 
 
 
-
 
NC_009523  RoseRS_3561  transposase, IS4 family protein  87.29 
 
 
826 bp  115  3e-24  Roseiflexus sp. RS-1  Bacteria  normal  0.428349  normal 
 
 
-
 
NC_009523  RoseRS_3422  transposase, IS4 family protein  86.44 
 
 
826 bp  107  7e-22  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0574466 
 
 
-
 
NC_009523  RoseRS_3690  transposase, IS4 family protein  85.71 
 
 
825 bp  107  7e-22  Roseiflexus sp. RS-1  Bacteria  normal  0.241824  normal  0.0110371 
 
 
-
 
NC_009523  RoseRS_1382  transposase, IS4 family protein  85.59 
 
 
814 bp  99.6  2e-19  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.00156039  hitchhiker  0.00320613 
 
 
-
 
NC_009523  RoseRS_4423    84.13 
 
 
818 bp  91.7  4e-17  Roseiflexus sp. RS-1  Bacteria  normal  0.227705  normal  0.282412 
 
 
-
 
NC_009523  RoseRS_2629    91.38 
 
 
823 bp  75.8  0.000000000003  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_0675    89.66 
 
 
876 bp  67.9  0.0000000006  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0351205 
 
 
-
 
NC_009523  RoseRS_0636    100 
 
 
135 bp  48.1  0.0006  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.00239894  normal  0.243236 
 
 
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