Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2130 |
Symbol | |
ID | 5209092 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2622683 |
End bp | 2623508 |
Gene Length | 826 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640595732 |
Product | transposase, IS4 family protein |
Protein accession | YP_001276461 |
Protein GI | 148656256 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACGAC GTGCACTTCG ATCCTATCCA ACCAAGTATG CGACCGATCT GACCGATGCG CAATGGGCCG CCATCGCGCC ACTCGTCATC ACCCCGTCGC CCAACGGCGG GCGTCCGACC GAAATCGATC GCCGCGCGAT CGTCAACGCG CTGCTCTCCA AAAATCGCAC GGGCTGTCAA TGGCGCATGC GTCCGAAAGA TGTTCCGCCA ATGAGCTCCG TTCGGTACTC TTTCGACAAA TGGAATCGTG ATGGAACCTT TATCAAAATC AATGATACGC TGCGGAAACT GGCGCGACAG GCGCTGAACC GCGACCCGGA GCCGTCCATC AGCGTCCTGG ACTCCCAATC CGTCAAAACG ACCGAAGCAG GCGGAGAACG CGGCTATGAT GGGGGAAAAA AAGGTCAACG GGCGCAAACG GCAGTTCTGG GTTGACACCA ATGGGTTTTT GTTGCGCGTG TTGGTCCATC CCGCCGATAT TTCGGATACT GAAGGCGCTG AGTGGCTTCT CGCCGCGCAT CATCAATCGT TTCCTCGGAT GCAAGAAATT CGGGTGGATG AAGGATACAA ACAAGGGTTA AATGAATGGA TGCAACAGAA CACGACGATA CGCCTGAATG TCATCGAAAA ACCGCCTGGA CAAAAGGGAT TTGCCGTCAT CCCGAAGCGA TGGGTGGTGG AACGCTCGAT TGCGTGGGCG GGACGCAATC GGTTGTTGCG GCGAATAATT ATTCGCCGCA ACAACCGCAA TCCAGAATCA AGCGAAGCCT TTCTTTATCT CGGTTCTATT GCAATGCTCC TGAATAGGCT TTATCCGAGG TGTTAG
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Protein sequence | MPRRALRSYP TKYATDLTDA QWAAIAPLVI TPSPNGGRPT EIDRRAIVNA LLSKNRTGCQ WRMRPKDVPP MSSVRYSFDK WNRDGTFIKI NDTLRKLARQ ALNRDPEPSI SVLDSQSVKT TEAGGERGYD GGKKVNGRKR QFWVDTNGFL LRVLVHPADI SDTEGAEWLL AAHHQSFPRM QEIRVDEGYK QGLNEWMQQN TTIRLNVIEK PPGQKGFAVI PKRWVVERSI AWAGRNRLLR RIIIRRNNRN PESSEAFLYL GSIAMLLNRL YPRC
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