Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1756 |
Symbol | |
ID | 5208713 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2172287 |
End bp | 2173112 |
Gene Length | 826 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640595362 |
Product | transposase, IS4 family protein |
Protein accession | YP_001276096 |
Protein GI | 148655891 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000595151 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.154833 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACGAC GTGCGCTTCG ATCCTATCCA ACCAAGGATG CGACCGATCT GACCGATGAA CAGTGGGCCG CTATCGCGCC ACTCGTCACC GCGCCGTCGC CCAACGGCGG GCGTCCGACC GAAATTGATC GCCGCGCGAT CGTCAACGCG CTGCTCTCCA AAAATCGTAC GGGCTGCCAA TGGCGCATGC TTCCGAAAGA TGTTCCGCCA ATGAGTTCCG TTCGGTACTA TTTCGACAAA TGGAATCGTG ATGGAACATT CATCAAAATC AATGATACGC TGCGGAAACT GGCGCGACAG GCGTTGAATC GCGATCCGGA GCCGTCCATC AGCGTCCTGG ACTCCCAATC CGTCAAAACG ACCGAAGCAG GCGGAGAACG CGGCGACGAT GGGGGAAAAA AAGGTCAACG GGCGCAAACG GCAATTCTGG GTTGATACAA ATGGGTTCTT GTTGCGCGTG TTGGTCCATC CCGCCGATAT TTCGGATACT GAAGGCGCCG AGTGGCTTCT CGCCGCGCAT CATCACTCAT TTCCCCGGAT GCGCGAGATT CGCGTGGATG AGGGATACAA AAAAGGGTTA GATGAATGGC TGCAACAGAA CACGGCGATA CGCCTGAATG TTATTGAAAA ACCGCCTGGA CAAACGGGAT TTGCGGTCAT TCCGAAGCGA TGGGTGGTGG AACGCTCGAT TGCGTGGGCG GGACGCAATC GGTTGTTGCG GCGAATAATT ATTCGCCGCA ACAACCGCAA CCCAGAATCA AGCGAAGCCT TTCTTTATCT CGGTTCTATT GCAATGCTCC TGAATCGGCT CTATCCGAGA TGTTAG
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Protein sequence | MPRRALRSYP TKDATDLTDE QWAAIAPLVT APSPNGGRPT EIDRRAIVNA LLSKNRTGCQ WRMLPKDVPP MSSVRYYFDK WNRDGTFIKI NDTLRKLARQ ALNRDPEPSI SVLDSQSVKT TEAGGERGDD GGKKVNGRKR QFWVDTNGFL LRVLVHPADI SDTEGAEWLL AAHHHSFPRM REIRVDEGYK KGLDEWLQQN TAIRLNVIEK PPGQTGFAVI PKRWVVERSI AWAGRNRLLR RIIIRRNNRN PESSEAFLYL GSIAMLLNRL YPRC
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