Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3561 |
Symbol | |
ID | 5210539 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4456195 |
End bp | 4457020 |
Gene Length | 826 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640597156 |
Product | transposase, IS4 family protein |
Protein accession | YP_001277868 |
Protein GI | 148657663 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.428349 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCACGAC GTGCACTTCG ATCCTATCCA ACCAAGGATG CGACCGATCT GACCGATGCG CAATGGGCCG CCATCGCGCC ACTCGTCGTC ACCCCGTCGC CCAACGGCGG GCGTCCGACC GACATCGATC GCCGCGCGAT CGTCAACGCC CTGCTGTACA AACATCGCAC GGGCTGTCAA TGGCGCATGC GTCCGACGGA TGTTCCGCCA ATGAGCTCCG TTCGGTACTA TTTTGACAAA TGGAATCGTG ATGGAACGTT CGTCAAAATG AATGATATGC TGCGGAAACT GGCGCGACAA GCGCTGGACC GTGACCCGGA GCCGTCCATC AGCGTCCTGG ACTCCCAATC CGTCAAAACG ACCGAAGCAG GCGGAGAACG CGGCTACGAT GGGGGAAAAA AAGGTCAATG GGCGCAAACG GCAATGCTGG GTTGATACAA AAGGGTTCTT GCTGCGCGTG CTCGTCCATC CGGCGGACAT CTCTGATACC GAAGGCGCGG AGTGGCTTTT GGCCGCGCAT CATCAATCGT TTCCTCGGAT GCAAGAGATT CGGGTGGATG AAGGATACAA ACAAGGGTTA AATGAATGGA TGCAACAGAA CACGACGATA CGCCTGAATG TCATTGAAAA ACCGCCTGGA CAAAAGGGAT TTGCCGTCAT CCCGAAGCGA TGGGTGGTGG AACGCTCGAT TGCGTGGGCG GGACGCAATC GCTGGGAGCG GCGAATAATT ATTCGCCGCA ACAACCGCAA TCCAGAATCA AGCGAAGCCT TTCTTTATCT CGGTTCTATT GCAATGCTCC TGAATCGGCT CTATCCGAGA TGTTAG
|
Protein sequence | MPRRALRSYP TKDATDLTDA QWAAIAPLVV TPSPNGGRPT DIDRRAIVNA LLYKHRTGCQ WRMRPTDVPP MSSVRYYFDK WNRDGTFVKM NDMLRKLARQ ALDRDPEPSI SVLDSQSVKT TEAGGERGYD GGKKVNGRKR QCWVDTKGFL LRVLVHPADI SDTEGAEWLL AAHHQSFPRM QEIRVDEGYK QGLNEWMQQN TTIRLNVIEK PPGQKGFAVI PKRWVVERSI AWAGRNRWER RIIIRRNNRN PESSEAFLYL GSIAMLLNRL YPRC
|
| |