21 homologs were found in PanDaTox collection
for query gene RoseRS_0102 on replicon NC_009523
Organism: Roseiflexus sp. RS-1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009523  RoseRS_0102    100 
 
 
244 bp  484  1e-135  Roseiflexus sp. RS-1  Bacteria  decreased coverage  0.0000409194  normal 
 
 
-
 
NC_009523  RoseRS_1382  transposase, IS4 family protein  91.03 
 
 
814 bp  184  7e-45  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.00156039  hitchhiker  0.00320613 
 
 
-
 
NC_009523  RoseRS_1437    87.5 
 
 
808 bp  143  3e-32  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0303465 
 
 
-
 
NC_009523  RoseRS_2629    91.03 
 
 
823 bp  99.6  3e-19  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_3690  transposase, IS4 family protein  90 
 
 
825 bp  95.6  5e-18  Roseiflexus sp. RS-1  Bacteria  normal  0.241824  normal  0.0110371 
 
 
-
 
NC_009523  RoseRS_0891    85.84 
 
 
807 bp  89.7  3e-16  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.000765218  unclonable  0.0000148237 
 
 
-
 
NC_009523  RoseRS_4369    88.75 
 
 
287 bp  87.7  0.000000000000001  Roseiflexus sp. RS-1  Bacteria  normal  0.0407016  normal  0.373385 
 
 
-
 
NC_009523  RoseRS_3561  transposase, IS4 family protein  88.75 
 
 
826 bp  87.7  0.000000000000001  Roseiflexus sp. RS-1  Bacteria  normal  0.428349  normal 
 
 
-
 
NC_009523  RoseRS_4297    92.06 
 
 
825 bp  85.7  0.000000000000005  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.990793 
 
 
-
 
NC_009523  RoseRS_2051    88.61 
 
 
827 bp  85.7  0.000000000000005  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.294544 
 
 
-
 
NC_009523  RoseRS_2130  transposase, IS4 family protein  88.61 
 
 
826 bp  85.7  0.000000000000005  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_4423    87.5 
 
 
818 bp  79.8  0.0000000000003  Roseiflexus sp. RS-1  Bacteria  normal  0.227705  normal  0.282412 
 
 
-
 
NC_009523  RoseRS_1220    87.5 
 
 
1955 bp  79.8  0.0000000000003  Roseiflexus sp. RS-1  Bacteria  decreased coverage  0.0000904356  normal  0.888185 
 
 
-
 
NC_009523  RoseRS_1756  transposase, IS4 family protein  87.5 
 
 
826 bp  79.8  0.0000000000003  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.000000595151  normal  0.154833 
 
 
-
 
NC_009523  RoseRS_4034  transposase, IS4 family protein  87.5 
 
 
826 bp  79.8  0.0000000000003  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.000467614  normal 
 
 
-
 
NC_009523  RoseRS_1808  transposase, IS4 family protein  87.34 
 
 
826 bp  77.8  0.000000000001  Roseiflexus sp. RS-1  Bacteria  normal  0.20953  normal  0.0264581 
 
 
-
 
NC_009523  RoseRS_3422  transposase, IS4 family protein  87.34 
 
 
826 bp  77.8  0.000000000001  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0574466 
 
 
-
 
NC_009523  RoseRS_1764  transposase, IS4 family protein  87.34 
 
 
826 bp  77.8  0.000000000001  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.456198 
 
 
-
 
NC_009523  RoseRS_0694    87.34 
 
 
395 bp  77.8  0.000000000001  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.756719 
 
 
-
 
NC_009523  RoseRS_0241  transposase, IS4 family protein  87.34 
 
 
826 bp  77.8  0.000000000001  Roseiflexus sp. RS-1  Bacteria  normal  0.458028  normal  0.0118803 
 
 
-
 
NC_009523  RoseRS_0675    85 
 
 
876 bp  63.9  0.00000002  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0351205 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>