13 homologs were found in PanDaTox collection
for query gene PICST_64420 on replicon NC_009048
Organism: Scheffersomyces stipitis CBS 6054



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009048  PICST_64420  predicted protein  100 
 
 
813 aa  1669    Scheffersomyces stipitis CBS 6054  Eukaryota  normal  normal  0.0116008 
 
 
-
 
BN001307  ANIA_08886  repressor protein (AFU_orthologue; AFUA_8G02700)  23.36 
 
 
804 aa  194  7e-48  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.965911  normal 
 
 
-
 
BN001308  ANIA_01132  Negative-acting regulatory proteinPutative uncharacterized proteinRepressor protein ;; [Source:UniProtKB/TrEMBL;Acc:Q00784]  23.56 
 
 
901 aa  194  7e-48  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal  0.0914062 
 
 
-
 
NC_006684  CNB01990  aromatic amino acid family biosynthesis-related protein, putative  22.25 
 
 
1611 aa  137  9.999999999999999e-31  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.979482  n/a   
 
 
-
 
NC_009044  PICST_89141  predicted protein  23.99 
 
 
1571 aa  75.9  0.000000000003  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  normal 
 
 
-
 
BN001303  ANIA_10544  pentafunctional AROM polypeptide, putative (AFU_orthologue; AFUA_4G06460)  26.03 
 
 
688 aa  72  0.00000000004  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal  0.572044 
 
 
-
 
NC_008347  Mmar10_2976  shikimate dehydrogenase  23.4 
 
 
280 aa  48.5  0.0005  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_009043  PICST_30813  predicted protein  24.21 
 
 
309 aa  47.4  0.001  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  normal  0.401981 
 
 
-
 
NC_009511  Swit_2830  shikimate dehydrogenase  22.15 
 
 
289 aa  47  0.001  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.0523448 
 
 
-
 
NC_013525  Tter_0165  Shikimate kinase  28.57 
 
 
172 aa  46.6  0.002  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007778  RPB_4657  anaerobic benzoate catabolism transcriptional regulator  33.33 
 
 
305 aa  45.1  0.006  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.848783 
 
 
-
 
NC_011675  PHATRDRAFT_45535  predicted protein  23.28 
 
 
835 aa  44.7  0.008  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.370246  n/a   
 
 
-
 
NC_009485  BBta_0746  anaerobic benzoate catabolism transcriptional regulator  32.81 
 
 
306 aa  44.3  0.01  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.248494  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>