| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_30813 |
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| Symbol | |
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| ID | 4837786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | - |
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| Start bp | 1009026 |
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| End bp | 1009955 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 12 |
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| GC content | 46% |
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| IMG OID | 640389101 |
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| Product | predicted protein |
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| Protein accession | XP_001383822 |
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| Protein GI | 150864839 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.401981 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTAT CCACGGATGT GAAACGGTCC GAACCCTTGG AGATCAAATT ATTTGGCGAA
TCCATCCAGC ACTCCAGGGC CCCGTTGCTC CTCAACTACG TCTTCTCCAA GTTGGGCTTC
AATTGGAGGT ATGGCTTGTT GGACAGCAGT GATATTCCCG AGTTCGAACG GTTCTTGTAC
TCTGAAAGCT GTGCTGGCGC AGCTGTTACA ATGCCCAACA AGGTCAGGAT GTTCGATAAG
GTGAATACTG TGGACGAATC TGCCAGAGTA GTAGGAGCCA TCAATACAAT CTACTTGCGA
AACGACAACG ATGGGAACAA ATTATACATT GGTACTAATA CAGATACAAT AGGCATCAGA
GATTCATTCT TACTAAATGC CAAAGGTATT GTGGCCACAT CGAAGAAACT AGCAAAACCC
GGATTGGTGT ATGGTGGAGG AGGTGCATGC CGTTCAGCAA TATATGCTTT GCACGAATAT
TTCCACTGCT CCACTATATA TGTGGTCAAC AGATTTGCTC TGGAAGTGGA AGCGGTACGC
GAATCAATGG TTCTGGCAGG TTTCCAAGGT AAAATTGTCC ATATAGAGAG CCCAGAACTG
GCACAAGCCG TGGAATCGCC ATTGCTTATA GTGAGCACCG TTCCGGATTT TGCACCCATT
ACTGAGGAAG AGCTTTTGGC CAGAAAAACA ATACAAGTTT TTCTAGAGTC GAAGACGAAA
GGCACTATTC TTGAGATGTG CTACCATCCC AAGCCATCCA CAAGACTTTT CAAGGAGTTC
GAGGCTAGTG GTTGGAAAGT GATTTCAGGC ATCGAAGCCA TGATCTACCA GGGTCTTGCC
CAGCTGGAGT TGTGGACTGG GACCACCCTT CCGGAGAGTA GCATTAGGGA GACAATAGAG
TATGTCTACA AGATAATCGA AAAAGAGTAG
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| Protein sequence | MTLSTDVKRS EPLEIKLFGE SIQHSRAPLL LNYVFSKLGF NWRYGLLDSS DIPEFERFLY
SESCAGAAVT MPNKVRMFDK VNTVDESARV VGAINTIYLR NDNDGNKLYI GTNTDTIGIR
DSFLLNAKGI VATSKKLAKP GLVYGGGGAC RSAIYALHEY FHCSTIYVVN RFASEVEAVR
ESMVSAGFQG KIVHIESPES AQAVESPLLI VSTVPDFAPI TEEELLARKT IQVFLESKTK
GTILEMCYHP KPSTRLFKEF EASGWKVISG IEAMIYQGLA QSELWTGTTL PESSIRETIE
YVYKIIEKE
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