| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_2976 |
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| Symbol | |
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| ID | 4285179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Maricaulis maris MCS10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008347 |
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| Strand | + |
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| Start bp | 3258457 |
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| End bp | 3259299 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638142472 |
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| Product | shikimate dehydrogenase |
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| Protein accession | YP_758195 |
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| Protein GI | 114571515 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCCGA CGGGAGCTGC TTTTGTTGCC GGCGTGACTG GCGACCCCAT CGCTCACTCC
CTGTCCCCGG TTGTGATGCG GCACTGGATC GATGCTGCGG GCATTGATGC CCTGTACGCG
CCCTTCCCGA TCAGCGCTGG CAATTTCGAT CGCGTGGTGC GCGGTCTGGC AGGAGCAGGC
TGTCGCGGAC TCAATGTTAC ACTGCCGCAC AAGGAAGCTG CCCTTGAGCT TGCCCGCACC
GCGTCCGGGC CGGCCCGTGC CGTCGGCGCC GCGAACCTCC TGACATTCAC GCCTGCGGGA
ATCCATGCTG ACAATACTGA CATAGCCGGT TTCCTGTATG CACTGGCGCC TGCCAATGTT
GAATTCAGAA AGGCAAGGGC ATTGATATTC GGAGCAGGTG GCGCAGCCCG GGCGATGCTT
TATGCGCTCC TGACAGTCGG GGTGACAGAT GTGGCGATCT GCAACCGCAA TATCACCCGC
GCCCAGGGGC TGTCCCGCGA CATAGCGCCG GATGCCGGCA TCATTCCCTG GGAGGCGCGC
GACGATGCCT TGCAGGGTCG TGATTTGATC ATCAATGCGA CCTCTCTGGG TTTGGCAGGC
CGCGATGAAT TGGCGCTCGA CTGGCAACGG GTTCGACCCG GTAGTGTTGC GTTTGATGGT
ATCTATATCC CTGTCAATAC ACGGTTTATC GTTGAATCCA GGGCGCGCGG TGTGACCGCG
ATTGACGGTC TGGACATGCT GATCGGGCAG GCACGGCCCA GCTTTGAAGC CTTCTTTGGC
CGCCCGGCGC CCGATTTGCC GGATATGCGC AGCCGTCTGC TCGAGCATCT GGGAGCGCGT
TGA
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| Protein sequence | MIPTGAAFVA GVTGDPIAHS LSPVVMRHWI DAAGIDALYA PFPISAGNFD RVVRGLAGAG
CRGLNVTLPH KEAALELART ASGPARAVGA ANLLTFTPAG IHADNTDIAG FLYALAPANV
EFRKARALIF GAGGAARAML YALLTVGVTD VAICNRNITR AQGLSRDIAP DAGIIPWEAR
DDALQGRDLI INATSLGLAG RDELALDWQR VRPGSVAFDG IYIPVNTRFI VESRARGVTA
IDGLDMLIGQ ARPSFEAFFG RPAPDLPDMR SRLLEHLGAR
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