| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNB01990 |
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| Symbol | |
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| ID | 3255768 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006684 |
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| Strand | - |
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| Start bp | 579231 |
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| End bp | 584373 |
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| Gene Length | 5143 bp |
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| Protein Length | 1611 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | 638254848 |
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| Product | aromatic amino acid family biosynthesis-related protein, putative |
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| Protein accession | XP_569127 |
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| Protein GI | 58263434 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase
[COG0169] Shikimate 5-dehydrogenase
[COG0337] 3-dehydroquinate synthetase
[COG0703] Shikimate kinase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase
[TIGR01093] 3-dehydroquinate dehydratase, type I
[TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase
[TIGR01357] 3-dehydroquinate synthase
[TIGR01809] shikimate-5-dehydrogenase, fungal AROM-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.979482 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AAACAGGCCA GGCGAAAGAA AAGGCAACAT GTCTTCGTCC TCCGCCGATG TCCTCAAAAT
CTCCATCCTG GGGAATGAGT CCATCCACGT TGGATTCCAT CTCCTTCCCT ACATCTTCAA
AACCATCACA ACCACTCTCC CCTCCTCCAC CTATGTCCTT ATCACCGATA CAAATCTCTC
CGCAATCTAT CTCAATGACT TCAAAGCCTC ATTTGAAGAG GCTGCATCCG AGGCCGACAA
CAAGGCGAGA TTCCTCGTCT ATGAAGTCGC TCCCGGAGAG GGCGCAAAGA GCCGAAAAGT
CAAGGGCGAA ATCGAGGATT GGATGCTTGA TAACAAGTGC ACCAGAGATA CTGTGATCCT
TGCATTCGGT GGTGGTGTCA TTGGCGACCT TACTGGATTT GTTGCTGCTA CTTTGTGGGT
TCCTTGTTTT GGATGGTGAC GAGTTGCGCT GATTCTTGGC TTGGATAGTA TGCGAGGCGT
CAAGTTTGTC CAAATCCCGA CGACCCTTCT TGCCATGGTT GACTCTTCTG TTGGTGGAAA
GACCGCTATC GACACCCCAC ATGGCAAGAA CCTCATTGGT GCATTCTGGC AGCCCAGCTA
CATCTTCGTT GACCTCGCTT TCCTTACTAC ACTTCCTACC AGGGAAGTCT CCAATGGCAT
GGCCGAGGTA ATCAAGGTAA GTCATCTAAA TTGAGGCGTA TCGGACTTTC TGACCGAAAG
ATAGACTGCC GCTATCTGGA AAGATGATGA TTTCGCTCTC CTTGAGTCAC GTTCTGCCGA
GATTTCTCTA GCAGCCTCTT CTCGCCCCAC TGGCGTCCCT ACTGCTGGTC GTTTCGTCTC
TGACCGCTCT CACGCTCAGT CTCTCCTTCT TCAGGTCGTT TCTGGATCAA TCTATGTTAA
GGCTCATATC GTGACTATCG ATGAACGAGA GACTGGTCTT CGAAACCTTG TCAACTTTGG
ACATACCATC GGACATGCCA TCGAGGCTGT CCTTACTCCC GCAATGCTTC ACGGCGAGTG
TGTCTCAGTT GGTATTGTTC TTGAGGCCGA AGTCGCTAGA CAACTCGGTA TTCTTAGTCA
AGTGGCTGTC GGACGTCTTA CCAGATGTCT TCAAGCTTAT GGCTTACCAG TCTCCCTCTC
TGATAGGCGA ATTACCGCCC TTCCTGCCTC GAGCCAGCTT TCCGTTGACC GTCTTCTCGA
CATTATGAAG ATTGACAAGA AGAACTCGGG TCCTGCCAAA AAAATCGTTC TCCTCTCTCG
GATTGGCAAA ACTTACGAGG AGAAGGCATC TGTCGTTGCC GACGACGTCA TCAGCAAAGT
CTTGTGCGAA GCAGTCACTG TAAAGGCTGC CACTCCCACC AAATCCCCAA TTACCATGGC
TACTCCTGGA AGTAAGAGCA TCTCTAATCG TGCTTTGGTG CTTGCTGCCC TTGGTAAGGG
CACGTGTAGG GTAAGGAACC TCTTGCACTC TGACGATACT GCCGTCATGA TGAATGCTCT
CGTAGAGCTC AAGGTAGGTT TGGCCATTGT TACCCTTGTC CACGTCGGAG TCCTAATTGT
CAATTTAGGG CGCTGTATTT TCCTGGGAAG ATGGTGGCGA TACCATTGTC GTTGAAGGCG
GAGGTGGCAT TCTCTCCACT CCAGCAAAGG GCAAGGAGCT TTATCTCGGT AATGCCGGCA
CTGCCAGTCG ATTTCTCACC ACTGTTTGCG CCATGGTCTC AGGCTCTGCT TCAAGCGAGA
GATCGACGGT CATCACTGGC AACGCTCGTA TGAAGCAACG TCCCATCGGG CCTTTGGTCG
ACGCTCTCAC CGCCAATGGC GCGAAGGTCA AGTATCTCGA GTCTACGGGA TGCCTCCCAC
TTGATATCGA CACAGACGGT TTCCGTGGAG GGCACATCCA GCTTGCTGCA TCTGTATCTT
CCCAATACGT CTCCTCAATC CTTCTTTGCG CTCCTTACGC TGCTGAGCAA GTCACCCTTG
AGCTTACTGG TGGGCAGGTC ATTTCACAGC CCTACATCGA TATGACCATC GCCATGATGA
AACAATTTGG TGCCACCGTC GAGCGTCAGA AGGATGAGCA AGGTAACTTG CTTGACATCT
ACGTGATTCC CAAGTGTACG TATGTCAATC CTCCCGAGTA CAGCGTCGAA TCCGATGCGT
CCAGTGCTAC CTACCCCCTT GCGATCGCGG CCATCACTGG TACCACCTGT ACTATATCCA
ACATTGGCTC TTCTTCTCTT CAGGGTGATG CTCGATTTGC CAAAGAAATC CTCGAACCCA
TGGGTTGTAT TGTTGAACAG ACACTTACCA GCACCAAGGT CACCGGCCCT CCTGTGGGCA
CTTTGAGGGC ACTCGGTAAC GTTGACATGG AGCCCATGAC AGATGCTTTC TTGACTGCAT
CAGTATTGGC TGCTGTGGCT GTGAAGCCTT GTCTGCCTGA GAGAAAGGTC GAGGGTTTGC
CCGAAACCGC TTCAAGGATC TACGGTATCG CCAACCAAAG AGTTAAGGAG TGTAACAGAA
TCCAAGCCAT GAGGGATCAA CTTGGTAAGT TATGCAATGC GATACTTGCT GCCCGTATGC
TAATACATTT GATTAGCGAA ATTCGGTATT GAGACTGACG AATTTGACGA CGGTATCATC
ATTTTTGGCA AGCCTGAAGC CTCGCTCTTC CGAGGTGCCT CTATTCACTG CTATGACGAT
CATCGCGTGG CCATGGCATT TGCGGTGTTG TCGTGTATCA TCGACGAGAC CATTATCGAG
GAAAAGCGTT GCGTTGAGAA GACTTGGCCC AATTTCTGGG ATGACTTACA AAACAAGGTG
CGCAATGAGT TTGTAAGGCA TTTGCTTATG CTGACGTGGC CATGATACAT GTTAGATTGG
CGTTGCTGTG GAAGGTGTAG AGCTTGAAAC GCACAACCAG GCCTCCACCT CTGCCAAACC
GGTTTCTCCC ATCGACCAAT CCCAGTCCGA TCGACCCATC TTCCTTATCG GTATGCGTGG
TGCTGGCAAG ACTTACGTTG GTCGAATGGC TGCCGACATC CTTTCTGGCC AGTTCACTGA
CGCCGATGAT GTTTTCGCTC AGGAGAGCCA CCAGACTGTA TCCGAATTTG TTGCGGCCAA
CGGATGGGAC GAATTTAGGA AGAAGGAGAC CGAGATCCTA AGCAAGTTCG TTGAGGAACA
CAGGGGTAAT CACGTTATCG CTCTTGGGGG TGGTATAGTG GAAACTGAAA CGGCGAGAGA
GACCTTGAAG GCACACGTGG CTAAGGGTGG CCATGTCGTT CACGTTACCA GGGCACTGGA
GGACATTGAG GCCTACCTTG ACTCCATCGG AAATACCGCT GTTAGACCCA ACTGGGGTGA
GACCTTCGCA GACGTTTTTA AGAGGAGGGA GCCTTGGTAC CAGGCTTGTT CCAGCCACGA
ATTCTATAAT GTCCTTGAAG CAGTCGGCGG TCAGACGCAT GAGGAACATA CCAAGGCGAT
GCGAGCGGAA TGCGGAAGAT TCTTCAAGTT TATCACTGGT CGAGAATCTA ATCGCCCACG
TTTGAGCGTC GGAAATCCTA CATCTTTCTT GTCATTGACC TTTCCTGACG TCACTCCCGC
TTTGATCCAC CTCGACGAGC TTACAGAGGG AGCCGATGCA GTTGAGTTCC GAGTCGATCT
TCTTAGCACA ACCGGTCAAG CTCCTACACG TCCGGCTCTT CCTCCTATCT CTTTTGTGGC
GAAACAGCTT GCTAGCCTTC GTCTTGCTAC CACATTGCCG ATTGTTTTCT CTGTAAGGTC
CAAGGACCAA GGAGGTATGG TTCCTTCCGA CAATGCAGAA GCCTATGGGG CTTTGGTTCG
TCTCGGTTTG CGTTGCGCTT GCGAGTATGT TGATCTCGAA GTTTGCTGGC CGGAGCAGCT
CCTTGACAGT ATCGTCCAAT TAAAGCGTGA GACACACATC ATTGCTTCTT GGCACGACTG
GACAGGCGAC ATGGCATGGG ATGGTGAGGA GATGAAGGCC AAACATGTTT TGTGTGAGAA
GTACGGTGAT GTCGCGAAGA TCGTTGGTAC GGCTAAGTCT GGATTGGACA ACGCCAAACT
TGCAATCTTT GTTGGTGAAG TTCAAAGCCA TCCTGGAGCC AAGCCTTTGT TGGCTATCAA
CATGGGTGCC GCTGGACAAC TTTCCAGAAT TTTGAACCCA ATCCTCACTC CTGTGACCCA
TGACGCCCTT CCTTCTCGAG CCGCTCCTGG TCAACTCACT GCCCGCGAAA TTCTCCAAGC
TCGTGCCCTC ACTGGCTCCC TCCCAGCCAA GAAGTTCGTG CTTTTCGGCA GTCCCATTGC
TCACTCCGTC TCGCCGTTAT TGCACAACGC CGGCTTCGCC ACCTTGGGTT TGCCCCATAC
CTATAGGTTG CACGAGTCCG AGAAAGTTGA TCAGGGAGTC TTGGAAGTGA TTCGATCCCC
AGATTTTGGT GGCGCGAGCG TCACTATCCC ACTCAAGCTT GATATCATTC CTCATCTTGA
TTCGGTTTCG GAAGATGCCA AGATCATTGG AGCTGTCAAC ACTGTCATCC CTCGGGGTGG
TAAGCTCCAT GGCGAGAACA CTGACTGGCA GGCTATTCAT CAGGCTGCTG CGCAGAATCT
CGATGCTGAT GCCCTCAGCT ATGGATCTTC CACCGCTCTC GTGATCGGTG CTGGTGGTAC
TTGTCGTGCG GCGATTTACG CAATGCACAA GCTCCGATTC AAGACCATCT ACTTGTTCAA
CCGGACACCT GAGAACGCTG CGAAAGTCAA GGCTTCTTTC CCTGAGTCTT ACAACATCGC
AGTCGTCACA TCTCTCTCTT CTTTGCCTGA GGCTCCTGTT GTAGTCGTCT CTACTGTCCC
TGGTAACTCT TTGACACTCG ACACATTTTC TCAAGGGATC TATTTACCAT CTGAAGTGCT
TTCCCGTCCG AAGGGTGTTG CCATTGACTT GGCTTACAAG CCTCATATGA CTGCCTTGTT
GCATGCTGCG GAAAAGAAGG AAGGGTGGAA GGTCGTACCT GGTGTAGAGA TCTTGTGTTT
GCAAGGATTC AAGCAGTTTG AAGAATGGAC TGGCAAGAGA GCGCCCCAGA AGAAGATGAG
GAAGGCAGTT TTGGACAAAT ACTTCGCGTA GTGTCTTGCG CCG
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| Protein sequence | MSSSSADVLK ISILGNESIH VGFHLLPYIF KTITTTLPSS TYVLITDTNL SAIYLNDFKA
SFEEAASEAD NKARFLVYEV APGEGAKSRK VKGEIEDWML DNKCTRDTVI LAFGGGVIGD
LTGFVAATFM RGVKFVQIPT TLLAMVDSSV GGKTAIDTPH GKNLIGAFWQ PSYIFVDLAF
LTTLPTREVS NGMAEVIKTA AIWKDDDFAL LESRSAEISL AASSRPTGVP TAGRFVSDRS
HAQSLLLQVV SGSIYVKAHI VTIDERETGL RNLVNFGHTI GHAIEAVLTP AMLHGECVSV
GIVLEAEVAR QLGILSQVAV GRLTRCLQAY GLPVSLSDRR ITALPASSQL SVDRLLDIMK
IDKKNSGPAK KIVLLSRIGK TYEEKASVVA DDVISKVLCE AVTVKAATPT KSPITMATPG
SKSISNRALV LAALGKGTCR VRNLLHSDDT AVMMNALVEL KGAVFSWEDG GDTIVVEGGG
GILSTPAKGK ELYLGNAGTA SRFLTTVCAM VSGSASSERS TVITGNARMK QRPIGPLVDA
LTANGAKVKY LESTGCLPLD IDTDGFRGGH IQLAASVSSQ YVSSILLCAP YAAEQVTLEL
TGGQVISQPY IDMTIAMMKQ FGATVERQKD EQGNLLDIYV IPKCTYVNPP EYSVESDASS
ATYPLAIAAI TGTTCTISNI GSSSLQGDAR FAKEILEPMG CIVEQTLTST KVTGPPVGTL
RALGNVDMEP MTDAFLTASV LAAVAVKPCL PERKVEGLPE TASRIYGIAN QRVKECNRIQ
AMRDQLAKFG IETDEFDDGI IIFGKPEASL FRGASIHCYD DHRVAMAFAV LSCIIDETII
EEKRCVEKTW PNFWDDLQNK IGVAVEGVEL ETHNQASTSA KPVSPIDQSQ SDRPIFLIGM
RGAGKTYVGR MAADILSGQF TDADDVFAQE SHQTVSEFVA ANGWDEFRKK ETEILSKFVE
EHRGNHVIAL GGGIVETETA RETLKAHVAK GGHVVHVTRA LEDIEAYLDS IGNTAVRPNW
GETFADVFKR REPWYQACSS HEFYNVLEAV GGQTHEEHTK AMRAECGRFF KFITGRESNR
PRLSVGNPTS FLSLTFPDVT PALIHLDELT EGADAVEFRV DLLSTTGQAP TRPALPPISF
VAKQLASLRL ATTLPIVFSV RSKDQGGMVP SDNAEAYGAL VRLGLRCACE YVDLEVCWPE
QLLDSIVQLK RETHIIASWH DWTGDMAWDG EEMKAKHVLC EKYGDVAKIV GTAKSGLDNA
KLAIFVGEVQ SHPGAKPLLA INMGAAGQLS RILNPILTPV THDALPSRAA PGQLTAREIL
QARALTGSLP AKKFVLFGSP IAHSVSPLLH NAGFATLGLP HTYRLHESEK VDQGVLEVIR
SPDFGGASVT IPLKLDIIPH LDSVSEDAKI IGAVNTVIPR GGKLHGENTD WQAIHQAAAQ
NLDADALSYG SSTALVIGAG GTCRAAIYAM HKLRFKTIYL FNRTPENAAK VKASFPESYN
IAVVTSLSSL PEAPVVVVST VPGNSLTLDT FSQGIYLPSE VLSRPKGVAI DLAYKPHMTA
LLHAAEKKEG WKVVPGVEIL CLQGFKQFEE WTGKRAPQKK MRKAVLDKYF A
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