40 homologs were found in PanDaTox collection
for query gene MCA1288 on replicon NC_002977
Organism: Methylococcus capsulatus str. Bath



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_002977  MCA1288  N-acetylmuramoyl-L-alanine amidase domain/peptidoglycan binding domain-containing protein  100 
 
 		 617 aa  1254    Methylococcus capsulatus str. Bath  Bacteria  normal  0.426363  n/a   
 
 
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NC_011830  Dhaf_2966  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  35.33 
 
 		 242 aa  97.4  6e-19  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000101487  n/a   
 
 
-
 
NC_011830  Dhaf_4820  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  37.89 
 
 		 236 aa  90.1  1e-16  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0627398  n/a   
 
 
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NC_008346  Swol_1062  negative regulator of beta-lactamase expression-like protein  37.09 
 
 		 222 aa  86.3  0.000000000000002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_1933  N-acetylmuramyl-L-alanine amidase negative regulator of AmpC, AmpD  28.21 
 
 		 330 aa  60.8  0.00000007  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007802  Jann_1219  negative regulator of AmpC, AmpD  30.46 
 
 		 227 aa  54.7  0.000005  Jannaschia sp. CCS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008254  Meso_2018  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  36 
 
 		 251 aa  53.5  0.00001  Chelativorans sp. BNC1  Bacteria  normal  0.169128  n/a   
 
 
-
 
NC_007517  Gmet_1188  peptidoglycan binding domain-containing protein  26.17 
 
 		 321 aa  52  0.00003  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_7871  N-acetylmuramoyl-L-alanine amidase  28.37 
 
 		 508 aa  51.2  0.00006  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009667  Oant_1732  N-acetylmuramoyl-L-alanine amidase  31.25 
 
 		 268 aa  51.2  0.00006  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_008044  TM1040_1916  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  40.85 
 
 		 219 aa  50.8  0.00008  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_3587  Negative regulator of beta-lactamase expression- like protein  28.67 
 
 		 467 aa  50.1  0.0001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.115346  normal  0.267565 
 
 
-
 
NC_013595  Sros_5785  N-acetylmuramoyl-L-alanine amidase  28.37 
 
 		 477 aa  50.4  0.0001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.204427  normal  0.0325548 
 
 
-
 
NC_013440  Hoch_6415  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  30.77 
 
 		 551 aa  50.4  0.0001  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008148  Rxyl_2196  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  29.58 
 
 		 490 aa  49.3  0.0002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.800961  n/a   
 
 
-
 
NC_009636  Smed_2104  N-acetylmuramoyl-L-alanine amidase  29.3 
 
 		 254 aa  48.1  0.0004  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.312946 
 
 
-
 
NC_009428  Rsph17025_2224  N-acetylmuramoyl-L-alanine amidase  32.37 
 
 		 219 aa  48.5  0.0004  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.719824  normal  1 
 
 
-
 
NC_009441  Fjoh_4944  N-acetylmuramoyl-L-alanine amidase  25.17 
 
 		 301 aa  48.1  0.0004  Flavobacterium johnsoniae UW101  Bacteria  normal  0.038406  n/a   
 
 
-
 
NC_010001  Cphy_1886  peptidoglycan binding domain-containing protein  39.13 
 
 		 635 aa  47.8  0.0005  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_009485  BBta_6183  1 N-acetylmuramoyl-L-alanine amidase  38.67 
 
 		 283 aa  47.8  0.0006  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.301475  normal  0.754247 
 
 
-
 
NC_009972  Haur_2270  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  32.38 
 
 		 748 aa  47.8  0.0007  Herpetosiphon aurantiacus ATCC 23779  Bacteria  unclonable  0.000172268  n/a   
 
 
-
 
NC_008148  Rxyl_3112  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  27.46 
 
 		 496 aa  47  0.001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_007794  Saro_3051  negative regulator of AmpC, AmpD  27.37 
 
 		 234 aa  47  0.001  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.8874  n/a   
 
 
-
 
NC_007493  RSP_2272  N-acetylmuramoyl-L-alanine amidase  32.62 
 
 		 223 aa  47  0.001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.421086  n/a   
 
 
-
 
NC_011831  Cagg_2282  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  26.71 
 
 		 641 aa  46.2  0.002  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  0.169822 
 
 
-
 
NC_010338  Caul_3680  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  28.57 
 
 		 243 aa  46.2  0.002  Caulobacter sp. K31  Bacteria  normal  0.86041  normal  0.729669 
 
 
-
 
NC_009049  Rsph17029_0947  N-acetylmuramoyl-L-alanine amidase  32.62 
 
 		 223 aa  46.2  0.002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.177704  normal  0.768005 
 
 
-
 
NC_013595  Sros_3389  Negative regulator of beta-lactamase expression- like protein  30.39 
 
 		 480 aa  46.2  0.002  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008752  Aave_0865  N-acetyl-anhydromuranmyl-L-alanine amidase  33.62 
 
 		 209 aa  45.8  0.002  Acidovorax citrulli AAC00-1  Bacteria  normal  0.27665  normal  0.1095 
 
 
-
 
NC_008261  CPF_0587  N-acetylmuramoyl-L-alanine amidase  26.26 
 
 		 553 aa  46.2  0.002  Clostridium perfringens ATCC 13124  Bacteria  normal  0.369962  n/a   
 
 
-
 
NC_011894  Mnod_4910  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  28.86 
 
 		 249 aa  45.4  0.003  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.456045  n/a   
 
 
-
 
NC_009505  BOV_1400  N-acetylmuramoyl-L-alanine amidase  28.97 
 
 		 268 aa  44.7  0.006  Brucella ovis ATCC 25840  Bacteria  normal  0.896798  n/a   
 
 
-
 
NC_011989  Avi_2906  N-acetylmuramoyl-L-alanine amidase  27.46 
 
 		 252 aa  44.3  0.006  Agrobacterium vitis S4  Bacteria  normal  0.923766  n/a   
 
 
-
 
NC_009511  Swit_0070  N-acetylmuramoyl-L-alanine amidase  27.63 
 
 		 241 aa  44.7  0.006  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004310  BR1444  N-acetylmuramoyl-L-alanine amidase  28.97 
 
 		 268 aa  44.7  0.006  Brucella suis 1330  Bacteria  normal  0.16069  n/a   
 
 
-
 
NC_009972  Haur_2928  N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD  26.76 
 
 		 426 aa  44.3  0.007  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_007958  RPD_3403  N-acetylmuramoyl-L-alanine amidase  33.82 
 
 		 288 aa  44.3  0.007  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0566227  normal  1 
 
 
-
 
NC_013595  Sros_9263  hypothetical protein  29.29 
 
 		 381 aa  44.3  0.007  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.553952 
 
 
-
 
NC_007778  RPB_1985  negative regulator of AmpC, AmpD  33.82 
 
 		 288 aa  43.9  0.009  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.116261  normal  1 
 
 
-
 
NC_007413  Ava_0960  peptidoglycan binding domain-containing protein  34.75 
 
 		 575 aa  43.9  0.009  Anabaena variabilis ATCC 29413  Bacteria  normal  0.538106  normal  1 
 
 
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