Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_3680 |
Symbol | |
ID | 5901136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 3974853 |
End bp | 3975584 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641564191 |
Product | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD |
Protein accession | YP_001685305 |
Protein GI | 167647642 |
COG category | [V] Defense mechanisms |
COG ID | [COG3023] Negative regulator of beta-lactamase expression |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.86041 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.729669 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGTTCC CAATTGGATT CGTCGACGCC CCGTCGCCGA ACTTCGACGC CCGCAAGAGC GTCCCCGACT GCGTCGTGCT GCACTATACC GGCATGGAGA CCGGCGAGGC GGCCTTGGCG CGGATGTGCG ACCCGGAGGC CAAGGTCTCG GCCCACTACA TGGTCGAGGA GGACGGCCGG GTCTTCCGCC TCGTGCCCGA GGAACGCCGC GCCTGGCACG CCGGCGCCGC CTTCTGGAAG GGCGTCAAGG ACATCAACTC GGCCTCGATC GGCGTCGAGA TCGTCAATCC CGGCCACGAA TTCGGCTATC GCCCGTTCCC CGACGCCCAG GTCGCGGCGG TGATCAACCT GCTGGCCGAC ATCCGCTCGC GCTGGACCAT CGACGACGAC CGCATCCTGG GCCATTCCGA CATCGCCCCC GGTCGCAAGA TCGACCCGGG CGAGCTGTTC CCCTGGAAGC GCCTGGCGCA GGCTGGCCAT GGCCTGTGGG TCGAACCGCC GCCATCGCCC GGCGCACCGC TAGGGCAGGG CGAGGAGGGC ACCGGCGTCT TCGCCCTGCA GGCCGGCCTG ACCCGGCTGG GCTACAACTG TCCGCCGTCG GGCAACTATG ACGAATGGAC CGCGACCGTG GTCGCCGCCT TCCAGCGCCA CTGGCTGCAG ACCCGTTTCG ACGGCGTCGC CGACGGCGAG ACCCGGGCCA GGCTGGTGGC CCTGCTGCGG GCCGCGGGCT GA
|
Protein sequence | MTFPIGFVDA PSPNFDARKS VPDCVVLHYT GMETGEAALA RMCDPEAKVS AHYMVEEDGR VFRLVPEERR AWHAGAAFWK GVKDINSASI GVEIVNPGHE FGYRPFPDAQ VAAVINLLAD IRSRWTIDDD RILGHSDIAP GRKIDPGELF PWKRLAQAGH GLWVEPPPSP GAPLGQGEEG TGVFALQAGL TRLGYNCPPS GNYDEWTATV VAAFQRHWLQ TRFDGVADGE TRARLVALLR AAG
|
| |