| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1886 |
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| Symbol | |
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| ID | 5744565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 2327638 |
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| End bp | 2329545 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641292983 |
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| Product | peptidoglycan binding domain-containing protein |
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| Protein accession | YP_001558994 |
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| Protein GI | 160880026 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3409] Putative peptidoglycan-binding domain-containing protein |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTACCAT TAATGAGAAA AAACAAGTTA CGAATTGCTA TCGTGGGCGC AGTAGTTGGT
TTAGGAGCGG CAGTAGCTAT TCCAAATAGT GTAGCGAAAG ATTATGCGCA GGAAGTAAAT
GCAAGAGCGA TGGTTGCTCA GCAACTTAGT TACGATGATA TTTCACCTGG TTTAATAAAT
GTAAGTCCAG TAAATCTTGA AAATAATAAG GTTACATTTT CGTTAAATAA CTCAGGAGAA
AAAGATACTT CTTCTTCAAA GTTAGAGGAT AATAAAAAGC CTCAAAATCA AGAGAATCAA
AAGAAAGACG TTAATTCATC AAACGTGGTT AACCCAGAAG ATAATAGTGA TAAAGTAGAC
CCATCTAAAG TAGTTTCTAA TGATGCAGAT GATCAAACCG AAGAGTTATC TGGTGATAAA
TGTGTAGATG ACTATACAAC TGTAATGTCT GTAGATGATT CATTAGACAC TCCAGAGAAG
GAAGAAGTAC CTGTAGTTGA TGAAGAACCA GCTCCTAAAT TTTATGATAT TGGTGTAAGA
CATAGCACTG TAATGGAAAT TCAACAAAGA TTAATGGATC TTGGCTTTAT GGAAGATGCA
GAACCAACTG ACTATTATGG TTCAATCACT GCGGAAGCAG TAAAAATGTT TCAGAGACAA
TCCGATTTAA AACAAGATGG AATCTTAGGG CCAGATACTT TTGAGATGTT ATTATCTGAC
AATGCGAAGC ATTATGCTGC TAAGTTAGGT ATGGATGGTG CAGATATTAA GCGTATCCAA
CAGCGTCTCT ATGAAATGGG CTATCTAGCT ACTGCTGATA TGGTAACAGG ACATTTTGGT
GATGTAACTG AAAGTGCTGT AAAGAAAATG CAGGAAAATA ATGGACTAGG TGTAGATGGT
AAAGTTGGTA AAATGACTGT GGACTTGCTC TATAGTGAAG AAGCTAAACC TAATCTTATA
GCATATGGAG AACAATCAGA TATCGTATTA GCTGCGCAGA AGAGATTAAA AGAACTTGGT
TATTTAACCA CTACTCCAGA TGGTAAGTAT GGTAATGATA CATCAGTTGC AGTAAAGCAG
TTCCAATCTA GAAATGACCT TGTAGTGGAT GGTTTCTTAG GACCTTCAAC AAGAGAGGTA
TTAAAGAGCT CTAGTGCAGT TCCAAACGGA GTAATGTTAG GTGATAGTGG TGATGCCGTT
AAGCGTATTC AAGAGTTATT AAATAAATAC GGATATCTTT CTTCTGCTAA TATGACTGGA
TATTTTGGTG AAGTTACAGA AGATGCAGTA AAGAGTTTCC AAAAGAACAA TGGTTTATCT
GCAGACGGTA ATGTTGGTGT TATGACCATG ACAAAGTTAA CAAGTTCTGA TGTTGTGAAA
GCGAGTTCTA CATCTGGTGG AAGTAGTAAT TCTGGAAGTT CCAATAGCAA CAGCGGTTCT
TCTAACTCTA GTAACTCGGG TAACTCAAGT AACTCAAGTA ACTCAAGTAA TACTTCTTCA
AACAATAGCT CCTCTAACAA TAACTCTAAT AGTGGAGCAG TTAGTGGAAG CGTAAGTGAA
TTAATCCGTG TCGCTAAATC TAAAGTTGGT ACTCCTTATA TTTTAGGTGC AAAAGGGCCG
AATGCATTTG ATTGCTCTGG TTTTATTTAT TGGTGCTTAA ATCAAGTTGG AGTTAAACAG
AGTTATTTAA CATCAAGTGG TTGGAGAAGT GTTGGTAAAT ATAAGATGAT AACAAGTTTA
TCTAATGTAC AAGCCGGTGA TATCATCGTT GTAAGAGGAC ATGTTGGTAT TGCAGCTGGT
AATGGTACAG TTATAGATGC TTCTTCTTCC AGTGGTAGAA TTGTTTATCG TGATTTAAAT
TCTTGGTGGA GTAGTCGTTT TATTGTAGCA TGGCGTATTT TTGATTAA
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| Protein sequence | MLPLMRKNKL RIAIVGAVVG LGAAVAIPNS VAKDYAQEVN ARAMVAQQLS YDDISPGLIN
VSPVNLENNK VTFSLNNSGE KDTSSSKLED NKKPQNQENQ KKDVNSSNVV NPEDNSDKVD
PSKVVSNDAD DQTEELSGDK CVDDYTTVMS VDDSLDTPEK EEVPVVDEEP APKFYDIGVR
HSTVMEIQQR LMDLGFMEDA EPTDYYGSIT AEAVKMFQRQ SDLKQDGILG PDTFEMLLSD
NAKHYAAKLG MDGADIKRIQ QRLYEMGYLA TADMVTGHFG DVTESAVKKM QENNGLGVDG
KVGKMTVDLL YSEEAKPNLI AYGEQSDIVL AAQKRLKELG YLTTTPDGKY GNDTSVAVKQ
FQSRNDLVVD GFLGPSTREV LKSSSAVPNG VMLGDSGDAV KRIQELLNKY GYLSSANMTG
YFGEVTEDAV KSFQKNNGLS ADGNVGVMTM TKLTSSDVVK ASSTSGGSSN SGSSNSNSGS
SNSSNSGNSS NSSNSSNTSS NNSSSNNNSN SGAVSGSVSE LIRVAKSKVG TPYILGAKGP
NAFDCSGFIY WCLNQVGVKQ SYLTSSGWRS VGKYKMITSL SNVQAGDIIV VRGHVGIAAG
NGTVIDASSS SGRIVYRDLN SWWSSRFIVA WRIFD
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