Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0865 |
Symbol | |
ID | 4667648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 938808 |
End bp | 939437 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639822064 |
Product | N-acetyl-anhydromuranmyl-L-alanine amidase |
Protein accession | YP_969237 |
Protein GI | 120609559 |
COG category | [V] Defense mechanisms |
COG ID | [COG3023] Negative regulator of beta-lactamase expression |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.27665 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.1095 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCCTC CTGACCCGAA CGACGCTCCC GGGCACGGCG GCCCGGATGA AGCCGGCCCG CGCTGGAACG GCGGCTGGTA CCTGCCCGCC ATGGCCCTGC CCTCGCCGAA TTTCGGGCCC CGCCCCGCCC AGGCCGCCAT CGATCTCATC GTGGTGCATT CCATCAGCCT GCCCCCGGGC GAATACGGCA CCGGCGAAGT CCAGCGCCTC TTCACCAACG CGCTGGACTG GGACGCCCAC CCCTACTACG CCGGCATCCG CGGCCTGCAG GTATCGGCCC ACTTCTTCAT CGAGCGCGGC GGGCGGCTGT GGCAGTTCGT GGACTGCGGC GACCGCGCAT GGCACGCGGG CCCATCCGCC TACCGGGGCC GGGACAACTG CAACGACGAC TCGATCGGCA TCGAACTGGA AGGACTGGAG GGCGACACCT TCGAGCCCGC CCAGTACCAG GCGCTCGCCA CGCTGTGCCG GGACATCGCG CAACGCTATC CCGTGGCCCA CGTCGCGGGC CATGAGCATG TCGCGCCCGG ACGCAAGCGG GACCCCGGGC CGGGGTTCGA CTGGCGGGAG CTGCGGTCCC GGCTGGGCAG CCCGCGCATC GACTTCCCGC CGCAAGTCAA GCCCTCCTGA
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Protein sequence | MQPPDPNDAP GHGGPDEAGP RWNGGWYLPA MALPSPNFGP RPAQAAIDLI VVHSISLPPG EYGTGEVQRL FTNALDWDAH PYYAGIRGLQ VSAHFFIERG GRLWQFVDCG DRAWHAGPSA YRGRDNCNDD SIGIELEGLE GDTFEPAQYQ ALATLCRDIA QRYPVAHVAG HEHVAPGRKR DPGPGFDWRE LRSRLGSPRI DFPPQVKPS
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