Gene Aave_0865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0865 
Symbol 
ID4667648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp938808 
End bp939437 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content71% 
IMG OID639822064 
ProductN-acetyl-anhydromuranmyl-L-alanine amidase 
Protein accessionYP_969237 
Protein GI120609559 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.27665 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.1095 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCTC CTGACCCGAA CGACGCTCCC GGGCACGGCG GCCCGGATGA AGCCGGCCCG 
CGCTGGAACG GCGGCTGGTA CCTGCCCGCC ATGGCCCTGC CCTCGCCGAA TTTCGGGCCC
CGCCCCGCCC AGGCCGCCAT CGATCTCATC GTGGTGCATT CCATCAGCCT GCCCCCGGGC
GAATACGGCA CCGGCGAAGT CCAGCGCCTC TTCACCAACG CGCTGGACTG GGACGCCCAC
CCCTACTACG CCGGCATCCG CGGCCTGCAG GTATCGGCCC ACTTCTTCAT CGAGCGCGGC
GGGCGGCTGT GGCAGTTCGT GGACTGCGGC GACCGCGCAT GGCACGCGGG CCCATCCGCC
TACCGGGGCC GGGACAACTG CAACGACGAC TCGATCGGCA TCGAACTGGA AGGACTGGAG
GGCGACACCT TCGAGCCCGC CCAGTACCAG GCGCTCGCCA CGCTGTGCCG GGACATCGCG
CAACGCTATC CCGTGGCCCA CGTCGCGGGC CATGAGCATG TCGCGCCCGG ACGCAAGCGG
GACCCCGGGC CGGGGTTCGA CTGGCGGGAG CTGCGGTCCC GGCTGGGCAG CCCGCGCATC
GACTTCCCGC CGCAAGTCAA GCCCTCCTGA
 
Protein sequence
MQPPDPNDAP GHGGPDEAGP RWNGGWYLPA MALPSPNFGP RPAQAAIDLI VVHSISLPPG 
EYGTGEVQRL FTNALDWDAH PYYAGIRGLQ VSAHFFIERG GRLWQFVDCG DRAWHAGPSA
YRGRDNCNDD SIGIELEGLE GDTFEPAQYQ ALATLCRDIA QRYPVAHVAG HEHVAPGRKR
DPGPGFDWRE LRSRLGSPRI DFPPQVKPS