| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0960 |
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| Symbol | |
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| ID | 3681180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 1160358 |
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| End bp | 1162085 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637716294 |
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| Product | peptidoglycan binding domain-containing protein |
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| Protein accession | YP_321479 |
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| Protein GI | 75907183 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3391] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.538106 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACAC TTGCTTATTT GCATTTGGCT GAGACTTATG AAACATCTAC CACGGATGAA
TCTTCCCCGG AAATACCTTG GACAAAGAAC CAGAGTGGCG CTTTAATGTT GGTGGCTTCT
TTTGCAATGG GTTCTTTAAA TTGGTGTCTT CCTGCTGCGG CTGCTTTAAA AAAAGGTCAC
AGAAATCCTC AGGTAGCATC GCTCCAGCAA AAGTTGCGAG CAAGCGGATA TTTTTCGCAA
GCCGCTACAG GATATTTTGG TTCTGTCACT GAAGCAGCTG TGAAGAGATT TCAAGAAGCT
AATGGTTTAA AGGCTGATGG AATTGTTGGG GCAGCAACCT TGGCAGCTTT AGAATCTACT
ATGGGTGTAT CAGAATCTAG TATCACCACT CCCCCAATAG CTGCGTCTAA ATCTTCTCTC
AAACGGGGTG ATATTAGCGA TAGGGTGATG TCTTTGCAAG AAAAACTACA AGCAGATGGA
TACTATCAAG GGGCGATTAC TGGAAATTTT GACACTGCCA CCCAAGCAGC TGTAATTCAA
TTCCAACAAG CTAATCGGCT CGTCGCTGAT GGAATTGTCG GGCCAAAAAC ATCATCAGTT
TTAGCGTCAA GTACCAGAAA ATTAGCGGCT TCGTTACCTC AAAAAACTAC CCTCGAACCT
TTTTTAACAG AGCAGCCACA AAAGCCACAA AATCAGGTAA AGATAGCACC CCAATCAGCC
GCACCTCCCA GTCCCTCACA AAAAATGCGG CTCATCAAAA CTATTTCTGG GAAAATTTCC
CCTAAATCAG TGGTTTATTC GGGTAATGGT TTATTCTTTG CCCAAAATAT GATGTATAAC
CACACAATTA CTGTATATGA CCGCAACTAT GAATTAGTTA AAGTTATCCC TGACGAAGTA
GACTTATCTA AATATGGTCA TTCTCGCTTC AAGGGTAAGT ATAGAGGCGC TCCAGTTGAA
GCTAGTTTTT CCCATAATGG CAAGTATGCT TGGATATCTA ACTATCAAAT GTACGGGCCT
GGTTTTAATA ACCCCGGTAG TGATAAATGT CATCCATCCC AAAAAACTGA CAAGAGTTTT
TTATATCGCA TTAATACAGA AACCCTCAAG ATAGACAGAG TTATTCCAGT TGGTTCTGTA
CCGAAATTTG TGGCTACTTC TACCGATGAA AACCTAATAC TAGTAAGCAA CTGGTGTTCT
TGGGATTTGA GTGTGGTAGA TATTAATCAA AATCAAGAAA TCAAACGGAT TAAATTAGGC
CCTTATCCTC GCGGAATTGT TGTTGATGCA GCTTCTGAAA CAGCCTACGT CGCTGTTATG
GGGTCTTACA ACATTGCTAA AGTTAACCTG AGGGATTTTT CTGTACAGTG GCTGCGAAAC
ATTGGTAGTT CACCGCGTCA CTTAAATATT GATCCTGAGG GTAAATATCT TTATGCTTCT
TTAAATGGTG AAGGCAAAAT TGCTAAAATC AGCTTGCCTC AAGGTAATTT AGTCAAGAAA
ATCGCTACAG GTAATGCTCC CCGTAGTATG GTTTTATCAG CTAATGGTCA AACACTTTAT
GTTGTGAACT ACGGTGAAGA TACAGTTAGC AAGGTTCGGA CTAGTGACAT GAAGGTATTA
CAAAAAGTCA AAGTTGAACC TGATCCTATC GGCATTACTT ACGATCCACA AACTAGAGAA
GTTTGGGTAG CTTGTTATTC GGGCAATATC ATGATTTTTC AAGATTAG
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| Protein sequence | MDTLAYLHLA ETYETSTTDE SSPEIPWTKN QSGALMLVAS FAMGSLNWCL PAAAALKKGH
RNPQVASLQQ KLRASGYFSQ AATGYFGSVT EAAVKRFQEA NGLKADGIVG AATLAALEST
MGVSESSITT PPIAASKSSL KRGDISDRVM SLQEKLQADG YYQGAITGNF DTATQAAVIQ
FQQANRLVAD GIVGPKTSSV LASSTRKLAA SLPQKTTLEP FLTEQPQKPQ NQVKIAPQSA
APPSPSQKMR LIKTISGKIS PKSVVYSGNG LFFAQNMMYN HTITVYDRNY ELVKVIPDEV
DLSKYGHSRF KGKYRGAPVE ASFSHNGKYA WISNYQMYGP GFNNPGSDKC HPSQKTDKSF
LYRINTETLK IDRVIPVGSV PKFVATSTDE NLILVSNWCS WDLSVVDINQ NQEIKRIKLG
PYPRGIVVDA ASETAYVAVM GSYNIAKVNL RDFSVQWLRN IGSSPRHLNI DPEGKYLYAS
LNGEGKIAKI SLPQGNLVKK IATGNAPRSM VLSANGQTLY VVNYGEDTVS KVRTSDMKVL
QKVKVEPDPI GITYDPQTRE VWVACYSGNI MIFQD
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