Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0960 |
Symbol | |
ID | 3681180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 1160358 |
End bp | 1162085 |
Gene Length | 1728 bp |
Protein Length | 575 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637716294 |
Product | peptidoglycan binding domain-containing protein |
Protein accession | YP_321479 |
Protein GI | 75907183 |
COG category | [S] Function unknown |
COG ID | [COG3391] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.538106 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACAC TTGCTTATTT GCATTTGGCT GAGACTTATG AAACATCTAC CACGGATGAA TCTTCCCCGG AAATACCTTG GACAAAGAAC CAGAGTGGCG CTTTAATGTT GGTGGCTTCT TTTGCAATGG GTTCTTTAAA TTGGTGTCTT CCTGCTGCGG CTGCTTTAAA AAAAGGTCAC AGAAATCCTC AGGTAGCATC GCTCCAGCAA AAGTTGCGAG CAAGCGGATA TTTTTCGCAA GCCGCTACAG GATATTTTGG TTCTGTCACT GAAGCAGCTG TGAAGAGATT TCAAGAAGCT AATGGTTTAA AGGCTGATGG AATTGTTGGG GCAGCAACCT TGGCAGCTTT AGAATCTACT ATGGGTGTAT CAGAATCTAG TATCACCACT CCCCCAATAG CTGCGTCTAA ATCTTCTCTC AAACGGGGTG ATATTAGCGA TAGGGTGATG TCTTTGCAAG AAAAACTACA AGCAGATGGA TACTATCAAG GGGCGATTAC TGGAAATTTT GACACTGCCA CCCAAGCAGC TGTAATTCAA TTCCAACAAG CTAATCGGCT CGTCGCTGAT GGAATTGTCG GGCCAAAAAC ATCATCAGTT TTAGCGTCAA GTACCAGAAA ATTAGCGGCT TCGTTACCTC AAAAAACTAC CCTCGAACCT TTTTTAACAG AGCAGCCACA AAAGCCACAA AATCAGGTAA AGATAGCACC CCAATCAGCC GCACCTCCCA GTCCCTCACA AAAAATGCGG CTCATCAAAA CTATTTCTGG GAAAATTTCC CCTAAATCAG TGGTTTATTC GGGTAATGGT TTATTCTTTG CCCAAAATAT GATGTATAAC CACACAATTA CTGTATATGA CCGCAACTAT GAATTAGTTA AAGTTATCCC TGACGAAGTA GACTTATCTA AATATGGTCA TTCTCGCTTC AAGGGTAAGT ATAGAGGCGC TCCAGTTGAA GCTAGTTTTT CCCATAATGG CAAGTATGCT TGGATATCTA ACTATCAAAT GTACGGGCCT GGTTTTAATA ACCCCGGTAG TGATAAATGT CATCCATCCC AAAAAACTGA CAAGAGTTTT TTATATCGCA TTAATACAGA AACCCTCAAG ATAGACAGAG TTATTCCAGT TGGTTCTGTA CCGAAATTTG TGGCTACTTC TACCGATGAA AACCTAATAC TAGTAAGCAA CTGGTGTTCT TGGGATTTGA GTGTGGTAGA TATTAATCAA AATCAAGAAA TCAAACGGAT TAAATTAGGC CCTTATCCTC GCGGAATTGT TGTTGATGCA GCTTCTGAAA CAGCCTACGT CGCTGTTATG GGGTCTTACA ACATTGCTAA AGTTAACCTG AGGGATTTTT CTGTACAGTG GCTGCGAAAC ATTGGTAGTT CACCGCGTCA CTTAAATATT GATCCTGAGG GTAAATATCT TTATGCTTCT TTAAATGGTG AAGGCAAAAT TGCTAAAATC AGCTTGCCTC AAGGTAATTT AGTCAAGAAA ATCGCTACAG GTAATGCTCC CCGTAGTATG GTTTTATCAG CTAATGGTCA AACACTTTAT GTTGTGAACT ACGGTGAAGA TACAGTTAGC AAGGTTCGGA CTAGTGACAT GAAGGTATTA CAAAAAGTCA AAGTTGAACC TGATCCTATC GGCATTACTT ACGATCCACA AACTAGAGAA GTTTGGGTAG CTTGTTATTC GGGCAATATC ATGATTTTTC AAGATTAG
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Protein sequence | MDTLAYLHLA ETYETSTTDE SSPEIPWTKN QSGALMLVAS FAMGSLNWCL PAAAALKKGH RNPQVASLQQ KLRASGYFSQ AATGYFGSVT EAAVKRFQEA NGLKADGIVG AATLAALEST MGVSESSITT PPIAASKSSL KRGDISDRVM SLQEKLQADG YYQGAITGNF DTATQAAVIQ FQQANRLVAD GIVGPKTSSV LASSTRKLAA SLPQKTTLEP FLTEQPQKPQ NQVKIAPQSA APPSPSQKMR LIKTISGKIS PKSVVYSGNG LFFAQNMMYN HTITVYDRNY ELVKVIPDEV DLSKYGHSRF KGKYRGAPVE ASFSHNGKYA WISNYQMYGP GFNNPGSDKC HPSQKTDKSF LYRINTETLK IDRVIPVGSV PKFVATSTDE NLILVSNWCS WDLSVVDINQ NQEIKRIKLG PYPRGIVVDA ASETAYVAVM GSYNIAKVNL RDFSVQWLRN IGSSPRHLNI DPEGKYLYAS LNGEGKIAKI SLPQGNLVKK IATGNAPRSM VLSANGQTLY VVNYGEDTVS KVRTSDMKVL QKVKVEPDPI GITYDPQTRE VWVACYSGNI MIFQD
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