| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_3112 |
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| Symbol | |
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| ID | 4114911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 3121911 |
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| End bp | 3123401 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638037879 |
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| Product | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD |
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| Protein accession | YP_645831 |
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| Protein GI | 108805894 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3023] Negative regulator of beta-lactamase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGCGCGG CGACGGTGGC CTTTCTGGCC CTGATGATAG CAGTAGTATC CGGCCTTGCC
GGCTCCGGGG GCGGGGCCGC GGCCCGGGAG GGAGGGAGCC TGGAAGGGGA GTTCCGGGCG
GCGGCCGCCG AGCACGGGGT GCCGGCAGAC CTGCTCAAGG CTATGGGCTA CGTGAACACG
CGCTGGGAGA TGCCCCCGCC GGAGGCGAGC GACTACGAGA AGGGCGCGAC CGAGGGCCGG
GGGCAGTACG GGATCATGGC GCTCACCCGC AACCCCTCGA AGGATACGCT GGGGCGCGCC
GCGAGGCTCA CCGGGCTCTC CGCGGAGCGG CTAAAGAACG ACCGGGCGGC GAACATCCGC
GGGGCGGCGG CGGTGCTCGC GGACATCCAG GGCGAGAGGA AGCCCCGCGG CATAAACGGC
TGGTACGAGG CGGTCTCGGA GTACGGTGAC GGGGTGCTCT ACGCCAACCA GGTCTACGAG
ACGCTGAGGA AGGGGGCGGA GGCGGAGATC TCGAGCGGCG AGAGGGTGCG GCTCAGGGCG
CACCCCGAGG CCGAGACCCG GGAGGTCTAC ACCACCATGG CCAGCGCGGA CTACGGGCGG
GCCACCTGGT ACGGGGCCCA CCCCGACAAC TACACCGACT CCAACCGGGA GCGCTCCTAC
GACATAAACC GGATCGTCAT CCACGTCACC CAGGGCTCCT GGTCGAGCGC CATAAACTGG
TTCAAGGACG GGAGGGCGCA GGTCTCCGCG CACTACACCG TCCGCTCCTC CGACGGGAAG
ATCGGCCAGA GCGTACGCGA GGCGGACATC GCCTGGCACG CGGGCAACTG GGACTACAAC
ACCCACAGCA TCGGGATCGA GCACGAGGGC TACGTCTCGC AGAAGCGGTG GTTCACCGAC
GCGATGTACC GCTCCTCGGC GCGGCTCGCG GCCTACCTGT GCAAGAAGTA CAGGATCCCG
ATCGACCGCA AGCACATCAT CGGGCACAAC CAGGTGCCCG GGGCCGACCA CACCGACCCC
GGCCCCTACT GGAACTGGGA CCGCTACATG CGGCTGGTGC GCAGCTACGC CGGAAGCTCG
ACCTACACCC AGGTGGTGGA CAACTCCTCG CCGCGCTTCA GCGCCTCCAG GGCTTGGGAC
CTCAACACCT GGAACCCGCA GAAGTACGGG AAGAACTACC GGGCCGCCAA GCCGCGCAAC
GTCAACGACC CGGCGCGCTA CAGGATAAAG ATCCCCAGGC GCGGCAAGTA CGCCGTCTTC
GCCTGGTGGC CGGCCAACGC CGGCTACAAC CAGCACACCC GCTACACCAT AAGGACGGTC
AGCGGGTGGC AGAAGCGGGT CGTAAACCAG GAGAAGAACG GCGGCCGGTG GGTGAAGCTC
GGCACCTACA CCCTCGCCGC CGGGGACCGG GTGTACGTCC GGGTGCACCG CGACGTCGCC
GGCAGGGACT GGGTGATCGC CGACGCGGTC CGCGTGAAGC GGGTGGGCTG A
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| Protein sequence | MRAATVAFLA LMIAVVSGLA GSGGGAAARE GGSLEGEFRA AAAEHGVPAD LLKAMGYVNT
RWEMPPPEAS DYEKGATEGR GQYGIMALTR NPSKDTLGRA ARLTGLSAER LKNDRAANIR
GAAAVLADIQ GERKPRGING WYEAVSEYGD GVLYANQVYE TLRKGAEAEI SSGERVRLRA
HPEAETREVY TTMASADYGR ATWYGAHPDN YTDSNRERSY DINRIVIHVT QGSWSSAINW
FKDGRAQVSA HYTVRSSDGK IGQSVREADI AWHAGNWDYN THSIGIEHEG YVSQKRWFTD
AMYRSSARLA AYLCKKYRIP IDRKHIIGHN QVPGADHTDP GPYWNWDRYM RLVRSYAGSS
TYTQVVDNSS PRFSASRAWD LNTWNPQKYG KNYRAAKPRN VNDPARYRIK IPRRGKYAVF
AWWPANAGYN QHTRYTIRTV SGWQKRVVNQ EKNGGRWVKL GTYTLAAGDR VYVRVHRDVA
GRDWVIADAV RVKRVG
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