Gene Meso_2018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_2018 
Symbol 
ID4182811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp2166890 
End bp2167645 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content61% 
IMG OID638067914 
ProductN-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD 
Protein accessionYP_674576 
Protein GI110634368 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.169128 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGGTT TTCCGCCCGA TTTTCCCGAG GCGGCGGTGC GGCCCTCTCC AAATTTCGGC 
GAGAGGCGAA AGGGGCGCAA GCCCGATGCT ATCATCTTGC ACTACACCGG AATGACGAGC
GGCCAGGCGG CGGAGGATTG GCTTTGCAAT CCGACCAGCG AAGTTTCTTC GCATTATCTG
GCGCACGAGG ATGGGCGCGT GGTCCAGATG GTTCCCGAAG CAGCGCGCGC CTGGCATGCG
GGCAGGGGCA GCTGGAAGGG CGAGGACGAC GTCAATTCGT TCTCCATCGG AGTGGAGATC
GTCAATCCGG GTCACCAGTT CGGCTATCGC GACTTTCCCT CTGTCCAGAT CGACGCCGTG
GCCGCTCTTT GCCTGGATAT CTGCCGCCGG AACGCAATTC TGCCACAAAG GGTGCTCGCC
CATTCCGACA CCGCACCCGG CCGCAAGGTC GATCCGGGCG AAAAATTTCC ATGGAAGCGA
CTCGCCGAGA TGGGCGTTGG CCATTACGTC GATCCGGAGC GGGTCACCGG CGGCGAGGTG
CTTGCGCCCG GTGATCGGGG CTCTGCGGTC GCGGGGCTAC AACGCCGCTT GGCTGAATAT
GGCTACGGAA TTGAAAAAAC GGGCGTTTTC GATGCCGAAA CCGAAACGGT CGTTGCTGCG
TTCCAGCGGC ATTTCCGCCC TTCAGCCGTC AATGGCATTG CCGATTCTTC GACATGCTCG
ACACTCGAAA AGCTGATTTT GGCCCTGCCG AAATAG
 
Protein sequence
MTGFPPDFPE AAVRPSPNFG ERRKGRKPDA IILHYTGMTS GQAAEDWLCN PTSEVSSHYL 
AHEDGRVVQM VPEAARAWHA GRGSWKGEDD VNSFSIGVEI VNPGHQFGYR DFPSVQIDAV
AALCLDICRR NAILPQRVLA HSDTAPGRKV DPGEKFPWKR LAEMGVGHYV DPERVTGGEV
LAPGDRGSAV AGLQRRLAEY GYGIEKTGVF DAETETVVAA FQRHFRPSAV NGIADSSTCS
TLEKLILALP K