| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2906 |
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| Symbol | |
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| ID | 7386093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2427652 |
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| End bp | 2428410 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643651920 |
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| Product | N-acetylmuramoyl-L-alanine amidase |
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| Protein accession | YP_002550105 |
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| Protein GI | 222149148 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3023] Negative regulator of beta-lactamase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.923766 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGCAT TCATCGCCGA TTATCCAGAC GCCGTGGTGG TGCCATCCCC GAATCACGGT
GAGCGCATCG AATGCGCGGC CCCTGACACC ATCATTCTGC ATTATACCGG CATGCCCAGC
GAAGAGGCAG CACTCTCCTG GCTCTGCACT GTGGAAAGCC AGGTTTCCAG CCATTATCTG
GTGCGTGAAA ACGGTGATGT CGTGCAGATG GTGCCGGAAA GCCGCCGAGC CTGGCATGCC
GGCAAGAGTT TCTGGGCAGG CGCGACCGAT ATCAATTCCC GCTCAATTGG TATCGAGATT
GCCAATGCCG GACATCCGTC TCTGCCGGAT TATCCCGAAA AACAGGTGGA TGCCGTCGCG
CAATTGTGTC TTGATTGTGC AAGTCGCTGG TCCATCGCCC CGGAGCGGGT GCTGGCCCAC
TCCGATATTG CCCCGGTTCG CAAGGTCGAT CCGGGCGAAC ATTTCCCCTG GGATCAGCTA
CACGCCCTGG GCGTAGGGCA TTGGGTGGAA CCAACCGCGA TCACTGGTGG CCGGTTCTTC
CAGAGAGGCG ATCGCGGCCA GCCGGTCGAG GCATTGCAAT CCATGTTGTC TCTCTATGGA
TACCCTGTTG AAATAAATGC GGATTTTGAT GCTGTGACCG AGGGTGTCGT CAGAAGTTTC
CAGCTGCATT TCCGCCCCTC CAAGGTCGAT GGCGTGGCTG ATTATTCGAC CATCGACACC
CTGCATCGTC TGCTGGCGGC GTTGCCGCGT TTCAGCTGA
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| Protein sequence | MTAFIADYPD AVVVPSPNHG ERIECAAPDT IILHYTGMPS EEAALSWLCT VESQVSSHYL
VRENGDVVQM VPESRRAWHA GKSFWAGATD INSRSIGIEI ANAGHPSLPD YPEKQVDAVA
QLCLDCASRW SIAPERVLAH SDIAPVRKVD PGEHFPWDQL HALGVGHWVE PTAITGGRFF
QRGDRGQPVE ALQSMLSLYG YPVEINADFD AVTEGVVRSF QLHFRPSKVD GVADYSTIDT
LHRLLAALPR FS
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