17 homologs were found in PanDaTox collection
for query gene Ksed_20170 on replicon NC_013169
Organism: Kytococcus sedentarius DSM 20547



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013169  Ksed_20170  hypothetical protein  100 
 
 		 108 aa  224  3e-58  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.0847124  normal  0.0246462 
 
 
-
 
NC_013169  Ksed_21120  transcriptional regulator  95.37 
 
 		 203 aa  217  3.9999999999999997e-56  Kytococcus sedentarius DSM 20547  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008705  Mkms_2681  TetR family transcriptional regulator  46.43 
 
 		 196 aa  71.2  0.000000000004  Mycobacterium sp. KMS  Bacteria  normal  1  normal  0.160159 
 
 
-
 
NC_009077  Mjls_2665  TetR family transcriptional regulator  46.43 
 
 		 196 aa  71.2  0.000000000004  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008146  Mmcs_2636  TetR family transcriptional regulator  46.43 
 
 		 196 aa  71.2  0.000000000004  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_011368  Rleg2_5162  transcriptional regulator, TetR family  40.62 
 
 		 193 aa  65.1  0.0000000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.134912  normal  0.642196 
 
 
-
 
NC_013595  Sros_0302  putative transcriptional regulator, TetR family  37.63 
 
 		 195 aa  60.8  0.000000007  Streptosporangium roseum DSM 43021  Bacteria  normal  0.475945  normal  1 
 
 
-
 
NC_013093  Amir_5283  transcriptional regulator, TetR family  34 
 
 		 184 aa  59.7  0.00000001  Actinosynnema mirum DSM 43827  Bacteria  normal  0.729406  n/a   
 
 
-
 
NC_012850  Rleg_0827  transcriptional regulator, TetR family  37.25 
 
 		 200 aa  59.3  0.00000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_0930  transcriptional regulator, TetR family  40.48 
 
 		 194 aa  54.3  0.0000005  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_5083  regulatory protein TetR  35.64 
 
 		 184 aa  50.1  0.00001  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.749425  normal  0.163121 
 
 
-
 
NC_013132  Cpin_3984  transcriptional regulator, TetR family  31.87 
 
 		 200 aa  45.4  0.0002  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.562971  normal  1 
 
 
-
 
NC_014210  Ndas_4081  transcriptional regulator, TetR family  32 
 
 		 206 aa  45.4  0.0003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009943  Dole_2974  TetR family transcriptional regulator  30.51 
 
 		 209 aa  45.1  0.0004  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
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NC_010725  Mpop_2830  transcriptional regulator, TetR family  31.58 
 
 		 208 aa  41.6  0.003  Methylobacterium populi BJ001  Bacteria  normal  1  normal  0.514088 
 
 
-
 
NC_013441  Gbro_3894  regulatory protein TetR  34.78 
 
 		 206 aa  42  0.003  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_010505  Mrad2831_2974  TetR family transcriptional regulator  35.87 
 
 		 225 aa  41.6  0.004  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.995598  normal  1 
 
 
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