Gene Dole_2974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2974 
Symbol 
ID5695833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand- 
Start bp3567111 
End bp3567740 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content59% 
IMG OID641265590 
ProductTetR family transcriptional regulator 
Protein accessionYP_001530854 
Protein GI158522984 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGC CCCGCAGTCC TGAAGCGATC GACGCCATAA AAGCCGTCAT TCTGGACCAT 
GCCCTGGATA TTATCGTGAG CCAGGGGCTG GATGACCTGA CCATGCGCAA CCTGGCCCGC 
CGCGCGAAGA TGACGGCCCC GAACCTCTAC AACTACTATT CGGGAAAAGA CGAGATTTAC 
CTTGCCCTGG TGGTCAAGGG GTTTGAAATG CTGCACGCGG ACCTGAAGGC GGCTTACGAA 
GGCTCCGGCA ACATCCGCAA GCGGGCAAAG GCCATGCTGG AGGCCTACCT GCGGTTCGGT 
ATGGAAAATT CCCGTTACTA CGACATCATG TTCGTGCTGC CCACGCCCAA GTACGATGAC 
TATAAAGGCA CGCCGTTTGA AGCCCTGTCC GAGACCGAGT ACCGGCTCTC CATGGAGATC 
GCGGCCATGG CGGAAAAGGC CATTGAAAAG GTTTACGGCC GGAAGGTGGA CAAGGCCGTT 
GTGACCCGCC GCCTGATCCA GGTCTGGAGC CTGGTCCACG GCATGGTGAG CCTGCACAAC 
AGCCAGGTGG CCGCCTACGT GGCCGAAGAC CTGCCGTCCA TCTACCGCGA CTCCATCGAT 
GAGCTGATCG ACCTGGTCGA ACGACTGTAA
 
Protein sequence
MKKPRSPEAI DAIKAVILDH ALDIIVSQGL DDLTMRNLAR RAKMTAPNLY NYYSGKDEIY 
LALVVKGFEM LHADLKAAYE GSGNIRKRAK AMLEAYLRFG MENSRYYDIM FVLPTPKYDD 
YKGTPFEALS ETEYRLSMEI AAMAEKAIEK VYGRKVDKAV VTRRLIQVWS LVHGMVSLHN 
SQVAAYVAED LPSIYRDSID ELIDLVERL