Gene Amir_5283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5283 
Symbol 
ID8329485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp6283261 
End bp6283815 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content76% 
IMG OID644945722 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003102950 
Protein GI256379290 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.729406 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGCAC AGCAGCGCCG GGAGCGGGAA CGGGCGGAGC GGCGGGGGGC GATCGTCGGG 
GCGGCGCGCG AACTGGCCGA GGCCGAGGGG TGGGAGGCGG TCACCACGCG GCGGCTCGCC 
GAGCTGATCG AGTACAGCCA ACCCGTGCTG TACAGCCACT TCTCCGGCAA GGACGCGATC 
ATCGCGGCGG TCGCCGTCGA GGGGTTCGCG GAGCTCGCCG AGCGGCTCGG GGGCGCGGAC 
GGGCTGGTCG GGCTCGCGCG CGCCTACACC GGGTTCGCGG AGGACAACCC GGCTTGCTAC 
GACGCGATGT TCACCCTCTC CGCACCGCTC GCGTTCGACG CGCCGGACAC CCCGCAGCCG 
CTGCGCGACG CGTTCACCGC GCTGCGGGAC GTCCTGGCGC CCCTGAGCCC CCAGGGCGAC 
CCGGACGTGT TCACCGAGGT CGTCTGGGGC GCGCTGCACG GGCAGGTGCT GCTGGCCCGA 
GGCGGCCGGT TGCCCGAGGC GAGGCGGGAC GCGCGGTTGG CCGCGCTGGT GGAGCTGGCC 
GGGGCGCGGC CGTAG
 
Protein sequence
MSAQQRRERE RAERRGAIVG AARELAEAEG WEAVTTRRLA ELIEYSQPVL YSHFSGKDAI 
IAAVAVEGFA ELAERLGGAD GLVGLARAYT GFAEDNPACY DAMFTLSAPL AFDAPDTPQP 
LRDAFTALRD VLAPLSPQGD PDVFTEVVWG ALHGQVLLAR GGRLPEARRD ARLAALVELA 
GARP