12 homologs were found in PanDaTox collection
for query gene CHU_0935 on replicon NC_008255
Organism: Cytophaga hutchinsonii ATCC 33406



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008255  CHU_0935  hypothetical protein  100 
 
 
583 aa  1192    Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0337995  normal  0.523565 
 
 
-
 
NC_010830  Aasi_0523  hypothetical protein  27.7 
 
 
582 aa  206  8e-52  Candidatus Amoebophilus asiaticus 5a2  Bacteria  n/a    normal  0.949132 
 
 
-
 
NC_013037  Dfer_1149  hypothetical protein  25.83 
 
 
567 aa  196  1e-48  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.658364  normal  0.0237518 
 
 
-
 
NC_013730  Slin_2013  hypothetical protein  26.27 
 
 
597 aa  193  7e-48  Spirosoma linguale DSM 74  Bacteria  normal  0.292522  normal 
 
 
-
 
NC_013061  Phep_0994  hypothetical protein  25.08 
 
 
407 aa  73.9  0.000000000006  Pedobacter heparinus DSM 2366  Bacteria  normal  0.207935  normal 
 
 
-
 
NC_013162  Coch_1862  Peptidoglycan-binding LysM  27.16 
 
 
642 aa  62  0.00000003  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.746272  n/a   
 
 
-
 
NC_014230  CA2559_01000  LysM-repeat domain protein  28.83 
 
 
651 aa  55.8  0.000002  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0678  Extracellular ligand-binding receptor  20.12 
 
 
476 aa  48.5  0.0004  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_002950  PG2150  LysM domain-containing protein  24.09 
 
 
501 aa  47.8  0.0005  Porphyromonas gingivalis W83  Bacteria  n/a    normal 
 
 
-
 
NC_013132  Cpin_6855  hypothetical protein  23.33 
 
 
440 aa  47.4  0.0008  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.374158 
 
 
-
 
NC_013501  Rmar_1517  outer membrane assembly lipoprotein YfiO  26.62 
 
 
1000 aa  46.2  0.002  Rhodothermus marinus DSM 4252  Bacteria  normal  0.261003  n/a   
 
 
-
 
NC_009441  Fjoh_2379  peptidoglycan-binding LysM  25.58 
 
 
698 aa  44.3  0.006  Flavobacterium johnsoniae UW101  Bacteria  normal  0.829657  n/a   
 
 
-
 
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