Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0935 |
Symbol | |
ID | 4183634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1072146 |
End bp | 1073897 |
Gene Length | 1752 bp |
Protein Length | 583 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638070934 |
Product | hypothetical protein |
Protein accession | YP_677554 |
Protein GI | 110637347 |
COG category | [S] Function unknown |
COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0337995 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.523565 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATCAG CTCTAAACCG CCTGCAACCA TTGAATGGGA ATAATATGAA ACTAAAAACA CTCTTACTTT TTGTTGCACT GATTCAATCC GTTGTTTCAA TGGCTCAACA AGATTGGAAA GGGGATTATA CACGTGCCAA GCAGGTTTAT CAATTGCAGA AATACGAAAT TGCAATGGAA TACTTTTTAC CTGTTACCTC GCCGGATGCT GCAAATCCAT ATGCATCGTA TGCGCAGTAT TATTACTCTT TATCGGCTTA CAAAGCGGGT AAGTATAATG AAGCACGTCA GATGCTGCTG CAATTAATCA ACAGAGATCC GAACTGGAAA CAGATCAGTG AAGCGCATTA TTTGCTTGCA GGCGTATATT TTGAACTGAA ACAGTATCGC TTTGGAATGA CTTCACTGAC GTTTGTTCAG GGAATGGAAA GTTCTGTTAC TACATTCAGA CAATCCTATT ATGCAAAAAT AGCACCTTTA GATACGTTGA TTAAACTGCA GCGCGTATAC TCTTCAGATA AAGAGCTTGC GAAAGCTTTA TTTAATCAGC TTGCAGCATA TCCTGTCAAT TCTAAAAATA ATATGCTGTA TGAATATCTG GCGCAGGAAT TTAAATTCAC AAAGCTGAAC CGCACCGTAA CGTATGTAAC CAAAACAGAA TATCATGTTG CGGTTATTTT GCCTTTTAAT TTAAGTGAGT CAAATTCTGA AAATTATAAA TCCGGTTATG CATATGAAAT GTATCAGGGC ATTTTAACAG CAGTAGATTC GTTAAAAGAA GATGGTGTTA CAATAAAAAT TCATACGTAC GATGCAGATC GCGATGTGAT GAAAATACAG GCGATCTTAA ATTATCCTGA AATGAAAGGA ATGGATTTAA TTATAGGGCC GTTGTTTCCT TCATTAATAC CATATGTAAC GAACTTTGGA GAGTTAAATA ACATTCCTGT AATCAATCCG ATTTCTTTTA ATTCAAATAT CATTGAAAAT AAAACACAGA CATTATTGTT TCAGCCAACA CTGGAGTCTA TAGCCGGGCA GGTTTCTTCA TTTGCAAAGG AAAAATTTGT TTACAGAAAA AACTCGTCGA AGGATAATGA TCTGAAGCCT AAAAACAATG TGTTAATTTT TTATTCAACA GAACTTAAGG ATTCATTGCT TGCCGTGTAT TATAGAGATT CGTTGCAGGT GAAAGGGTTT AAAGTTTCAA AGTTTGTAAA AGTAACAAAA GAAAATATCG GTACTGTAGG TAAGATATTT TCTGATTCGA TTTCGCTTTT AACAACAAGT CATGTTTTTG TAGCATCAGG TGAGCCTGTA CTTGCATCAA ATATTGTGAG TGCATTAGAG ATAAGCAGAC AAAATGTTCC TGTAATTACA AAGAGTGATT GGCTTGACAT CAATAATCAA ACCTACGAAC AATTCGAAAG AAGAAATATA TACATCATCT ATCCGGATTA TTTCGCTTTT TATACAGATG CATACAGGTC ATTTAAAGCC GCATATATTA AAAAATATAA TGTGTACCCC TCCAAGTATA CCATTATCGG ATATGAATTA ATGTCATTGG TAGGCGATAA AATGCGTACA GCCGGAACGG GTTACTTCAA TTTAATGCGC ACAAGCCCGG TTTCAAAAGG GCATTTTACA GCAGGGTATG ATTTCAGTAA AAAACCATGC AATAACTATG TTCCGATTTA TTATTTCAGT GATCTGAAAT TAACATTAGC GAATCCATTT GATGAAAAAT AA
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Protein sequence | MTSALNRLQP LNGNNMKLKT LLLFVALIQS VVSMAQQDWK GDYTRAKQVY QLQKYEIAME YFLPVTSPDA ANPYASYAQY YYSLSAYKAG KYNEARQMLL QLINRDPNWK QISEAHYLLA GVYFELKQYR FGMTSLTFVQ GMESSVTTFR QSYYAKIAPL DTLIKLQRVY SSDKELAKAL FNQLAAYPVN SKNNMLYEYL AQEFKFTKLN RTVTYVTKTE YHVAVILPFN LSESNSENYK SGYAYEMYQG ILTAVDSLKE DGVTIKIHTY DADRDVMKIQ AILNYPEMKG MDLIIGPLFP SLIPYVTNFG ELNNIPVINP ISFNSNIIEN KTQTLLFQPT LESIAGQVSS FAKEKFVYRK NSSKDNDLKP KNNVLIFYST ELKDSLLAVY YRDSLQVKGF KVSKFVKVTK ENIGTVGKIF SDSISLLTTS HVFVASGEPV LASNIVSALE ISRQNVPVIT KSDWLDINNQ TYEQFERRNI YIIYPDYFAF YTDAYRSFKA AYIKKYNVYP SKYTIIGYEL MSLVGDKMRT AGTGYFNLMR TSPVSKGHFT AGYDFSKKPC NNYVPIYYFS DLKLTLANPF DEK
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