Gene CHU_0935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0935 
Symbol 
ID4183634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1072146 
End bp1073897 
Gene Length1752 bp 
Protein Length583 aa 
Translation table11 
GC content35% 
IMG OID638070934 
Producthypothetical protein 
Protein accessionYP_677554 
Protein GI110637347 
COG category[S] Function unknown 
COG ID[COG1729] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0337995 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.523565 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCAG CTCTAAACCG CCTGCAACCA TTGAATGGGA ATAATATGAA ACTAAAAACA 
CTCTTACTTT TTGTTGCACT GATTCAATCC GTTGTTTCAA TGGCTCAACA AGATTGGAAA
GGGGATTATA CACGTGCCAA GCAGGTTTAT CAATTGCAGA AATACGAAAT TGCAATGGAA
TACTTTTTAC CTGTTACCTC GCCGGATGCT GCAAATCCAT ATGCATCGTA TGCGCAGTAT
TATTACTCTT TATCGGCTTA CAAAGCGGGT AAGTATAATG AAGCACGTCA GATGCTGCTG
CAATTAATCA ACAGAGATCC GAACTGGAAA CAGATCAGTG AAGCGCATTA TTTGCTTGCA
GGCGTATATT TTGAACTGAA ACAGTATCGC TTTGGAATGA CTTCACTGAC GTTTGTTCAG
GGAATGGAAA GTTCTGTTAC TACATTCAGA CAATCCTATT ATGCAAAAAT AGCACCTTTA
GATACGTTGA TTAAACTGCA GCGCGTATAC TCTTCAGATA AAGAGCTTGC GAAAGCTTTA
TTTAATCAGC TTGCAGCATA TCCTGTCAAT TCTAAAAATA ATATGCTGTA TGAATATCTG
GCGCAGGAAT TTAAATTCAC AAAGCTGAAC CGCACCGTAA CGTATGTAAC CAAAACAGAA
TATCATGTTG CGGTTATTTT GCCTTTTAAT TTAAGTGAGT CAAATTCTGA AAATTATAAA
TCCGGTTATG CATATGAAAT GTATCAGGGC ATTTTAACAG CAGTAGATTC GTTAAAAGAA
GATGGTGTTA CAATAAAAAT TCATACGTAC GATGCAGATC GCGATGTGAT GAAAATACAG
GCGATCTTAA ATTATCCTGA AATGAAAGGA ATGGATTTAA TTATAGGGCC GTTGTTTCCT
TCATTAATAC CATATGTAAC GAACTTTGGA GAGTTAAATA ACATTCCTGT AATCAATCCG
ATTTCTTTTA ATTCAAATAT CATTGAAAAT AAAACACAGA CATTATTGTT TCAGCCAACA
CTGGAGTCTA TAGCCGGGCA GGTTTCTTCA TTTGCAAAGG AAAAATTTGT TTACAGAAAA
AACTCGTCGA AGGATAATGA TCTGAAGCCT AAAAACAATG TGTTAATTTT TTATTCAACA
GAACTTAAGG ATTCATTGCT TGCCGTGTAT TATAGAGATT CGTTGCAGGT GAAAGGGTTT
AAAGTTTCAA AGTTTGTAAA AGTAACAAAA GAAAATATCG GTACTGTAGG TAAGATATTT
TCTGATTCGA TTTCGCTTTT AACAACAAGT CATGTTTTTG TAGCATCAGG TGAGCCTGTA
CTTGCATCAA ATATTGTGAG TGCATTAGAG ATAAGCAGAC AAAATGTTCC TGTAATTACA
AAGAGTGATT GGCTTGACAT CAATAATCAA ACCTACGAAC AATTCGAAAG AAGAAATATA
TACATCATCT ATCCGGATTA TTTCGCTTTT TATACAGATG CATACAGGTC ATTTAAAGCC
GCATATATTA AAAAATATAA TGTGTACCCC TCCAAGTATA CCATTATCGG ATATGAATTA
ATGTCATTGG TAGGCGATAA AATGCGTACA GCCGGAACGG GTTACTTCAA TTTAATGCGC
ACAAGCCCGG TTTCAAAAGG GCATTTTACA GCAGGGTATG ATTTCAGTAA AAAACCATGC
AATAACTATG TTCCGATTTA TTATTTCAGT GATCTGAAAT TAACATTAGC GAATCCATTT
GATGAAAAAT AA
 
Protein sequence
MTSALNRLQP LNGNNMKLKT LLLFVALIQS VVSMAQQDWK GDYTRAKQVY QLQKYEIAME 
YFLPVTSPDA ANPYASYAQY YYSLSAYKAG KYNEARQMLL QLINRDPNWK QISEAHYLLA
GVYFELKQYR FGMTSLTFVQ GMESSVTTFR QSYYAKIAPL DTLIKLQRVY SSDKELAKAL
FNQLAAYPVN SKNNMLYEYL AQEFKFTKLN RTVTYVTKTE YHVAVILPFN LSESNSENYK
SGYAYEMYQG ILTAVDSLKE DGVTIKIHTY DADRDVMKIQ AILNYPEMKG MDLIIGPLFP
SLIPYVTNFG ELNNIPVINP ISFNSNIIEN KTQTLLFQPT LESIAGQVSS FAKEKFVYRK
NSSKDNDLKP KNNVLIFYST ELKDSLLAVY YRDSLQVKGF KVSKFVKVTK ENIGTVGKIF
SDSISLLTTS HVFVASGEPV LASNIVSALE ISRQNVPVIT KSDWLDINNQ TYEQFERRNI
YIIYPDYFAF YTDAYRSFKA AYIKKYNVYP SKYTIIGYEL MSLVGDKMRT AGTGYFNLMR
TSPVSKGHFT AGYDFSKKPC NNYVPIYYFS DLKLTLANPF DEK