Gene Phep_0994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0994 
Symbol 
ID8252088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1161345 
End bp1162568 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content39% 
IMG OID644934648 
Producthypothetical protein 
Protein accessionYP_003091277 
Protein GI255530905 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.207935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTAG CTCAAAACCA CCAGCTACTA TTGAGTGGGA ATAAATATTG GATCCTGATA 
CTTTCAGTTC TTTTTTTATC GGCCTGCTCG CCAAAAATAA GAACTGAAAG TAAGCAGCCG
GAAGTTCCAA AAGAAGTGCC GAAAACAGAA AAGCCCGCTG CAAAATTTGA GCAGGCCAGT
ATTTCGTTGC TTGCCCCCTT CAGATTAAAT GAGATCCGGT TAAAAACTGC CACAAAAGCC
GAGGTAGAGA GGGCTGCCAT GGCCATCGAT TTTTATCAGG GTTTTAAGTT GGGTATAGAC
TCTGCCGCTG CATCAGGTCA GAATTTTAAG CTGAAAGTAT ACGATACGCA GGACAACAAT
GCCCAGATAG GGGCACTGAT TGACAATGGA GGGCTAATGG GCAGCAACCT GATTGTAGGG
CCTGTTTTTC CGGAAGGATT AAAATACATT ACCAATTATT CCATTTCCAG GAATATTCCG
GTAGTAAATC CATTATCGGC AGCCCATCCG GACGAATTTA CAAACCCCAA CCTCATCTCA
ATTGTAAACA ATGTTGATCA GCATGCAGCG AAAATTGGGA GTTACATCAG CAAAAATTAT
AATCCGGCAA ATACCGTAGT TGTACTGATC AATCCAAAGG GTTCCAGTGA TGAAGTAATG
GCCAAACCTT TAAGAGCCTA TTTTACTGAA AGGAATAAGT TCAGCTTTCA GGAATATGCT
TCTGTTTTTA CCATGGAGCC AAAAATTGTA AAAGGAAAAC AATACGTAAT TATTGTCAGT
TCATCCGACA GGAAATTTGT TGTGCCCACA CTGGATAAAT TGATGAAAAT CAGGAAGACA
GGGTTAAATA TCTCGGTTTT CGGGCATCCG GACTGGATCA AACAGAACTA CAATACCGAG
CAGCTGCAAG CTTTAAATAC CATCATTTCC TCTTCATATA AAATTGACTA TACCAGACCT
GAAGTCAACA CCTTCATCAG AAAGTACCGG GCCTCATTCA ATTTTGAGCC TGGAGAGTAT
TCGTTTAAAG GCTTTGACAT TGGTTTTTAT TTTGGTAAGT TACTTTCCAG CTATGGTGTT
GATTATTTAA AATACCTGAC CAAAGAAAGA TATAAAGGTC TGCACAATTC TTTTCGTTTT
ATGCACAACA ATACATTGGG GTACATTAAC ACCAGTTTAA TGCTGCTTAA ATATAAAAAC
TTTGCTTTAA ATATTGTTGA ATGA
 
Protein sequence
MTLAQNHQLL LSGNKYWILI LSVLFLSACS PKIRTESKQP EVPKEVPKTE KPAAKFEQAS 
ISLLAPFRLN EIRLKTATKA EVERAAMAID FYQGFKLGID SAAASGQNFK LKVYDTQDNN
AQIGALIDNG GLMGSNLIVG PVFPEGLKYI TNYSISRNIP VVNPLSAAHP DEFTNPNLIS
IVNNVDQHAA KIGSYISKNY NPANTVVVLI NPKGSSDEVM AKPLRAYFTE RNKFSFQEYA
SVFTMEPKIV KGKQYVIIVS SSDRKFVVPT LDKLMKIRKT GLNISVFGHP DWIKQNYNTE
QLQALNTIIS SSYKIDYTRP EVNTFIRKYR ASFNFEPGEY SFKGFDIGFY FGKLLSSYGV
DYLKYLTKER YKGLHNSFRF MHNNTLGYIN TSLMLLKYKN FALNIVE