Gene Fjoh_2379 details

Gene Information

• Locus tag: Fjoh_2379
• ID: 5092111
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Flavobacterium johnsoniae UW101
• Kingdom: Bacteria
• Replicon accession: NC_009441
• Strand: +
• Start bp: 2849834
• End bp: 2851930
• Gene Length: 2097 bp
• Protein Length: 698 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 644741807
• Product: peptidoglycan-binding LysM
• Protein accession: YP_001194725
• Protein GI: 146300134

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.829657
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATATT TTTCGACATT ATTATTCTTT GTTTTTTTTA TAACCTGTTC TGCTTTTTCG 
CAGGGAAAAG TAATTAAATA TACTGTATCC AGCGGAGAAA CAATCAATCA GATTGCTCAA 
AAATTCAAAG TCACACCTTA CGATATTTAT GAATTAAATC CTGATGCACG CAGCGGAGTA 
AAGCCTAATA CCGTTTTATT GATTCCGGCT GCGGCAAATA AAAATGCGGA TAAAAAAGAA 
ACAGCTGAGG CGAAATCGAC AGGTAATTCT AAAGAAATTA TTCACGAAGT ACAGCCAAAA 
GAAACTTTTT ACAGCATCGA AAAAAAATAT GGCATTTCTG ATGAAGCCTT AAAAGCGGCA 
AATCCAATTC TTGAAAAGAA CGGGGTTCAG ATTGGTCAGA AACTTGTGAT TCCTGCAAAA 
GGAGCAGCTC CTAAAAATAC AGCTGCAGCA GAGAAAAAAA CAAAAGAAAA AGGACCAGAA 
AAATATGTAT ACCATGAGGT TCAGGCAAAA GAAACAAAGT ATTCGATTGC AAAACAATAC 
AATACAACAG TTGAAGATTT AGAGAAAAGA AATCCTGAAA TCGTTTCCAG CTTACCAGTT 
GGATACAGAG TTACTATAAA AGGAACTGCT CCAAAAACAG AAACTGCGGC GCCGGTTTCT 
AAAGCTGAAG AACCTAAGAA AACTGAATCT AAAAAAACAG TTTCTTATAT GGAATATCAA 
GTAAAACCAA AAGAGACTTT TTATAGTTTA GGTAGAGTTT TTCATTTAAC ACAAGATGAG 
TTAGTTGCTT TAAATCCGTC ATTATCAGAA GGAGTAAAAG AAGGAATGGT TCTTAAAGTT 
CCTGCGGGAT ATGTAGCACC GGCACCAATC GTGGCTCAAT CTCAGCCAGC TGAAAAAGTA 
GCTGTTTCTA CACCGGTAGT AGTTGAAAAA CCTGCAGAAA ATACAGGAGG CGGTATTAAA 
ATTATAGATA AGGTAAAATC TGAAACTGTT TCGGCAGATC CTGAAATTGT TGAATTAACT 
AAGAAAAAAG GACAAAATGA CCGCCAGAAA TTAGTTTTAT TACTTCCTTT TAATTTAGCA 
AAATTACAAA CTGATACAAC CGGAATGGCG GCACGTTTAA AAACAGACAA ATTTTTAAAC 
ATGACACTTG ATTTTTATTC TGGAGCCATG ATGGCAATAG ACTCTGCTAA AACATTAAAA 
CTGCCAATTG ATGTTTCGAT TTACGATTCG CAGGAAACTA AAACTACATC GAATATTGCT 
TCTTTAATTG CGCAGAATAA ATTGCAGGAA GCAGATGCAG TTGTTGGGCC GTTTTACCAA 
AATAATGCAG AATCTACAGC AAATTCGCTT CGTTTATACA ATGTTCCGGT GATTTCGCCA 
TTGTCAAAAG ATGCGGCAAA TCCTATCGAT AATTTATATC AGACAGTTCC ATCAAATGAT 
GTAGTTCGAA ATGCGATTTT TGATTATATG AGAGCTAAAA ACGGAAACAT TGTGGCTGTT 
GTAGACAAGA AAAAAGAATC GGTTATCAAT TATATCAAAC AAAATCAAAA AGGAGTTGTT 
TTTGCCGGAT TAACAGAAAC CGGAGGTTTA GATGCTGCCA ATTTAAAAAG CCTTTTACTG 
CCGACACGTT TGAATTATGT GGTAATGGAA ACAGGAAATA CGGCGATGAT AAAAGCAACT 
ATAAAAGCTT TGATTGATTC TCAAAAAACA TGTCAGGTGC AGTTGGTAAT TCTAGAACCA 
AACAGTACGC TTGATACAGA CGAGATTAGT TTTGATAATT TGGTTCAGTT GAAATTAATG 
TATCCTTCTG TAACTCGCGA CAGTGACGAA CAAGGAGCTG CAATTTTCAA AAAAGAATAT 
AAATTGAAAA ATAAAGCCTA TCCAAATACA TACGCAACAA GAGGTTTTGA TGTAACTTTT 
GATACCATGA TGCGTTTGGT TCAGGGAAAA ACGTATCAGG AAACAGCAGA TTTAATGACA 
ACACAACAGG TTGACAATAA ATTTCAATTT TATAAAAAAG AAGATGGCGG ACACTCAAAT 
AAAGGTGTCT ACATTTTATA TTACGATTCA GACTTAACTT TAAAAGCAGC AAATTAA 

 

Protein sequence

MKYFSTLLFF VFFITCSAFS QGKVIKYTVS SGETINQIAQ KFKVTPYDIY ELNPDARSGV 
KPNTVLLIPA AANKNADKKE TAEAKSTGNS KEIIHEVQPK ETFYSIEKKY GISDEALKAA 
NPILEKNGVQ IGQKLVIPAK GAAPKNTAAA EKKTKEKGPE KYVYHEVQAK ETKYSIAKQY 
NTTVEDLEKR NPEIVSSLPV GYRVTIKGTA PKTETAAPVS KAEEPKKTES KKTVSYMEYQ 
VKPKETFYSL GRVFHLTQDE LVALNPSLSE GVKEGMVLKV PAGYVAPAPI VAQSQPAEKV 
AVSTPVVVEK PAENTGGGIK IIDKVKSETV SADPEIVELT KKKGQNDRQK LVLLLPFNLA 
KLQTDTTGMA ARLKTDKFLN MTLDFYSGAM MAIDSAKTLK LPIDVSIYDS QETKTTSNIA 
SLIAQNKLQE ADAVVGPFYQ NNAESTANSL RLYNVPVISP LSKDAANPID NLYQTVPSND 
VVRNAIFDYM RAKNGNIVAV VDKKKESVIN YIKQNQKGVV FAGLTETGGL DAANLKSLLL 
PTRLNYVVME TGNTAMIKAT IKALIDSQKT CQVQLVILEP NSTLDTDEIS FDNLVQLKLM 
YPSVTRDSDE QGAAIFKKEY KLKNKAYPNT YATRGFDVTF DTMMRLVQGK TYQETADLMT 
TQQVDNKFQF YKKEDGGHSN KGVYILYYDS DLTLKAAN