50 homologs were found in PanDaTox collection
for query gene Bcenmc03_3902 on replicon NC_010515
Organism: Burkholderia cenocepacia MC0-3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010515  Bcenmc03_3902  aromatic-ring-hydroxylating dioxygenase beta subunit  100 
 
 
166 aa  335  1.9999999999999998e-91  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.926313 
 
 
-
 
NC_008543  Bcen2424_3618  aromatic-ring-hydroxylating dioxygenase, beta subunit  98.19 
 
 
166 aa  327  3e-89  Burkholderia cenocepacia HI2424  Bacteria  normal  0.291454  normal 
 
 
-
 
NC_007511  Bcep18194_B2497  aromatic-ring-hydroxylating dioxygenase, beta subunit  97.59 
 
 
166 aa  327  6e-89  Burkholderia sp. 383  Bacteria  normal  0.0182458  normal 
 
 
-
 
NC_008391  Bamb_5354  aromatic-ring-hydroxylating dioxygenase, beta subunit  94.58 
 
 
167 aa  317  5e-86  Burkholderia ambifaria AMMD  Bacteria  normal  0.0204089  normal  0.785478 
 
 
-
 
NC_010086  Bmul_5080  aromatic-ring-hydroxylating dioxygenase beta subunit  92.77 
 
 
167 aa  316  7.999999999999999e-86  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.218107 
 
 
-
 
NC_010552  BamMC406_3524  aromatic-ring-hydroxylating dioxygenase beta subunit  93.37 
 
 
167 aa  316  9e-86  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.0527056 
 
 
-
 
NC_010681  Bphyt_2157  aromatic-ring-hydroxylating dioxygenase beta subunit  76.51 
 
 
166 aa  260  6e-69  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II0326  ring hydroxylating beta subunit  74.7 
 
 
166 aa  257  5.0000000000000005e-68  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A2104  putative aromatic-ring-hydroxylating dioxygenase, beta subunit  72.29 
 
 
166 aa  248  4e-65  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_3896  aromatic-ring-hydroxylating dioxygenase, beta subunit  47.74 
 
 
169 aa  147  7e-35  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009427  Saro_3813  aromatic-ring-hydroxylating dioxygenase, beta subunit  47.1 
 
 
165 aa  145  3e-34  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.257439  n/a   
 
 
-
 
NC_009511  Swit_4189  aromatic-ring-hydroxylating dioxygenase, beta subunit  45.95 
 
 
160 aa  137  7.999999999999999e-32  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.0692425 
 
 
-
 
NC_010322  PputGB1_2210  aromatic-ring-hydroxylating dioxygenase beta subunit  38.75 
 
 
159 aa  131  3e-30  Pseudomonas putida GB-1  Bacteria  normal  normal  0.72478 
 
 
-
 
NC_009511  Swit_0743  aromatic-ring-hydroxylating dioxygenase, beta subunit  43.05 
 
 
171 aa  126  1.0000000000000001e-28  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.158258 
 
 
-
 
NC_009654  Mmwyl1_1827  aromatic-ring-hydroxylating dioxygenase beta subunit  38.31 
 
 
160 aa  112  3e-24  Marinomonas sp. MWYL1  Bacteria  normal  0.475727  normal  0.661206 
 
 
-
 
NC_007509  Bcep18194_C7072  aromatic-ring-hydroxylating dioxygenase, beta subunit  32.45 
 
 
177 aa  72  0.000000000004  Burkholderia sp. 383  Bacteria  decreased coverage  0.00762065  normal  0.538573 
 
 
-
 
NC_007802  Jann_1344  aromatic-ring-hydroxylating dioxygenase, beta subunit  29.8 
 
 
159 aa  65.5  0.0000000003  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_0637  aromatic-ring-hydroxylating dioxygenase beta subunit  28.1 
 
 
178 aa  60.5  0.00000001  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_1532  aromatic-ring-hydroxylating dioxygenase, beta subunit  27.7 
 
 
162 aa  53.1  0.000002  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.014275 
 
 
-
 
NC_009511  Swit_4175  aromatic-ring-hydroxylating dioxygenase, beta subunit  23.81 
 
 
160 aa  52.4  0.000003  Sphingomonas wittichii RW1  Bacteria  hitchhiker  0.00253481  normal  0.0237067 
 
 
-
 
NC_008699  Noca_0827  aromatic-ring-hydroxylating dioxygenase, beta subunit  30.5 
 
 
196 aa  52  0.000004  Nocardioides sp. JS614  Bacteria  normal  0.0728938  n/a   
 
 
-
 
NC_007951  Bxe_A3555  p-cumate dioxygenase small subunit (CmtAc)  29.73 
 
 
180 aa  51.6  0.000005  Burkholderia xenovorans LB400  Bacteria  normal  0.0559586  normal  0.808229 
 
 
-
 
NC_012791  Vapar_1494  aromatic-ring-hydroxylating dioxygenase beta subunit  24.34 
 
 
162 aa  50.8  0.000007  Variovorax paradoxus S110  Bacteria  normal  0.708283  n/a   
 
 
-
 
NC_009338  Mflv_0568  aromatic-ring-hydroxylating dioxygenase, beta subunit  29.41 
 
 
169 aa  49.3  0.00002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.924793  normal 
 
 
-
 
NC_009511  Swit_1875  aromatic-ring-hydroxylating dioxygenase, beta subunit  26.24 
 
 
162 aa  48.9  0.00003  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2678  aromatic-ring-hydroxylating dioxygenase, beta subunit  23.68 
 
 
165 aa  48.9  0.00003  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_2635  2-chlorobenzoate 1,2-dioxygenase  26.81 
 
 
171 aa  48.5  0.00004  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_5383  aromatic-ring-hydroxylating dioxygenase beta subunit  24.49 
 
 
162 aa  48.5  0.00004  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008703  Mkms_5625  aromatic-ring-hydroxylating dioxygenase, beta subunit  34.51 
 
 
169 aa  48.1  0.00005  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0663  aromatic-ring-hydroxylating dioxygenase, beta subunit  34.34 
 
 
169 aa  48.1  0.00006  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_1634  aromatic-ring-hydroxylating dioxygenase, beta subunit  33.63 
 
 
236 aa  48.1  0.00006  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_0487  aromatic-ring-hydroxylating dioxygenase, beta subunit  34.34 
 
 
169 aa  48.1  0.00006  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_3236  putative dioxygenase beta subunit  23.74 
 
 
158 aa  47.8  0.00007  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.665811  normal  0.392142 
 
 
-
 
NC_008146  Mmcs_1641  aromatic-ring-hydroxylating dioxygenase, beta subunit  33.63 
 
 
169 aa  47.4  0.00009  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008703  Mkms_5621  aromatic-ring-hydroxylating dioxygenase, beta subunit  33.63 
 
 
169 aa  47.4  0.00009  Mycobacterium sp. KMS  Bacteria  normal  0.0675281  normal 
 
 
-
 
NC_008705  Mkms_1660  aromatic-ring-hydroxylating dioxygenase, beta subunit  33.63 
 
 
169 aa  47.4  0.00009  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_1667  aromatic-ring-hydroxylating dioxygenase, beta subunit  33.63 
 
 
169 aa  47.4  0.00009  Mycobacterium sp. KMS  Bacteria  normal  0.595327  normal 
 
 
-
 
NC_009338  Mflv_0670  aromatic-ring-hydroxylating dioxygenase, beta subunit  33.63 
 
 
181 aa  46.6  0.0001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_1503  aromatic-ring-hydroxylating dioxygenase beta subunit  28.03 
 
 
155 aa  46.6  0.0001  Variovorax paradoxus S110  Bacteria  normal  0.223026  n/a   
 
 
-
 
NC_009512  Pput_2897  aromatic-ring-hydroxylating dioxygenase, beta subunit  27.7 
 
 
180 aa  47  0.0001  Pseudomonas putida F1  Bacteria  normal  0.367264  normal  0.364758 
 
 
-
 
NC_008786  Veis_1994  aromatic-ring-hydroxylating dioxygenase, beta subunit  27.78 
 
 
180 aa  47  0.0001  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.605287 
 
 
-
 
NC_009077  Mjls_2238  aromatic-ring-hydroxylating dioxygenase, beta subunit  34.34 
 
 
169 aa  47  0.0001  Mycobacterium sp. JLS  Bacteria  normal  0.566158  normal 
 
 
-
 
NC_009338  Mflv_0572  aromatic-ring-hydroxylating dioxygenase, beta subunit  33.63 
 
 
181 aa  46.6  0.0001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.455615  normal 
 
 
-
 
NC_008726  Mvan_0483  aromatic-ring-hydroxylating dioxygenase, beta subunit  33.63 
 
 
169 aa  46.2  0.0002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.122818  normal 
 
 
-
 
NC_009077  Mjls_1607  aromatic-ring-hydroxylating dioxygenase, beta subunit  33.63 
 
 
169 aa  46.2  0.0002  Mycobacterium sp. JLS  Bacteria  normal  0.279924  normal 
 
 
-
 
NC_008463  PA14_37550  putative ring-hydroxylating dioxygenase small subunit  27.97 
 
 
169 aa  46.6  0.0002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0448308  normal 
 
 
-
 
NC_009077  Mjls_2244  aromatic-ring-hydroxylating dioxygenase, beta subunit  33.63 
 
 
169 aa  46.2  0.0002  Mycobacterium sp. JLS  Bacteria  normal  0.0227902  normal 
 
 
-
 
NC_007953  Bxe_C1196  biphenyl 2,3-dioxygenase small subunit (BphA2)  29.36 
 
 
213 aa  45.1  0.0004  Burkholderia xenovorans LB400  Bacteria  normal  0.45736  normal 
 
 
-
 
NC_007794  Saro_1681  aromatic-ring-hydroxylating dioxygenase, beta subunit  27.81 
 
 
166 aa  44.3  0.0007  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_1975  aromatic-ring-hydroxylating dioxygenase beta subunit  26.25 
 
 
189 aa  43.5  0.001  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
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