Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_C1196 |
Symbol | bphA2 |
ID | 4010708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007953 |
Strand | - |
Start bp | 1252311 |
End bp | 1252952 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637953788 |
Product | biphenyl 2,3-dioxygenase small subunit (BphA2) |
Protein accession | YP_556408 |
Protein GI | 91781201 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG5517] Small subunit of phenylpropionate dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 0.45736 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGGGCT GGACGTGCAT GTGCAGACGG CGCGCCGAGG TTCCGTCCCC TGATATTTAC TTGGAGATAA CTGTTATGAC AAATCCATCC CCGCATTTTT TCAAAACATT TGAATGGCCA AGCAAGGCGG CTGGCCTTGA GTTGCAGAAC GAGATCGAGC AGTTCTACTA CCGCGAAGCG CAGTTGCTTG ACCACCGGGC CTACGAGGCC TGGTTTGCCC TGCTGGACAA AGATATCCAC TACTTCATGC CGCTGCGCAC CAATCGCATG ATCCGGGAGG GCGAGCTGGA ATATTCCGGC GACCAGGATT TAGCCCATTT CGATGAAACC CATGAAACCA TGTACGGGCG CATCCGCAAG GTGACCTCGG ACGTGGGCTG GGCGGAGAAC CCGCCTTCCC GCACGCGCCA CCTGGTCTCC AACGTCATCG TCAAGGAGAC GGCCACGCCG GATACCTTCG AGGTCAATTC CGCATTCATC CTGTACCGCA ATCGGCTTGA GCGCCAGGTC GACATCTTCG CGGGCGAACG CCGGGACGTG CTGCGCCGCG CCGACAACAA CCTTGGTTTC AGCATCGCCA AGCGCACCAT CCTGCTCGAC GCCAGTACCT TGCTGTCGAA CAACCTGAGC ATGTTCTTCT AG
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Protein sequence | MVGWTCMCRR RAEVPSPDIY LEITVMTNPS PHFFKTFEWP SKAAGLELQN EIEQFYYREA QLLDHRAYEA WFALLDKDIH YFMPLRTNRM IREGELEYSG DQDLAHFDET HETMYGRIRK VTSDVGWAEN PPSRTRHLVS NVIVKETATP DTFEVNSAFI LYRNRLERQV DIFAGERRDV LRRADNNLGF SIAKRTILLD ASTLLSNNLS MFF
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