22 homologs were found in PanDaTox collection
for query gene BURPS1106A_A1056 on replicon NC_009078
Organism: Burkholderia pseudomallei 1106a



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009078  BURPS1106A_A1056  transcriptional regulator  100 
 
 
335 aa  635    Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A1141  transcriptional regulator  97.08 
 
 
319 aa  288  1e-76  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_0847  galactose-binding protein regulator  99.49 
 
 
221 aa  206  3e-52  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II1633  LysR family transcriptional regulator  86.15 
 
 
331 aa  108  2e-22  Burkholderia thailandensis E264  Bacteria  normal  0.749714  n/a   
 
 
-
 
NC_008391  Bamb_4926  LysR family transcriptional regulator  76.56 
 
 
316 aa  99  9e-20  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.181761 
 
 
-
 
NC_010552  BamMC406_5481  LysR family transcriptional regulator  76.56 
 
 
316 aa  99  1e-19  Burkholderia ambifaria MC40-6  Bacteria  normal  hitchhiker  0.0046066 
 
 
-
 
NC_007511  Bcep18194_B0040  LysR family transcriptional regulator  72.31 
 
 
316 aa  97.4  3e-19  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_4584  LysR family transcriptional regulator  70.77 
 
 
316 aa  95.1  1e-18  Burkholderia cenocepacia MC0-3  Bacteria  normal  hitchhiker  0.000974851 
 
 
-
 
NC_008061  Bcen_5214  LysR family transcriptional regulator  70.77 
 
 
316 aa  95.1  2e-18  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5645  LysR family transcriptional regulator  70.77 
 
 
316 aa  95.1  2e-18  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0239097  normal  0.200885 
 
 
-
 
NC_010086  Bmul_3201  LysR family transcriptional regulator  68.75 
 
 
316 aa  87  4e-16  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.0942378 
 
 
-
 
NC_012856  Rpic12D_2594  transcriptional regulator, LysR family  55.41 
 
 
314 aa  81.6  0.00000000000002  Ralstonia pickettii 12D  Bacteria  normal  0.437006  normal 
 
 
-
 
NC_010682  Rpic_3004  transcriptional regulator, LysR family  55.41 
 
 
314 aa  81.6  0.00000000000002  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6715  LysR family transcriptional regulator  58.73 
 
 
316 aa  76.3  0.0000000000006  Burkholderia phymatum STM815  Bacteria  normal  0.674594  normal 
 
 
-
 
NC_012791  Vapar_1042  transcriptional regulator, LysR family  55.56 
 
 
319 aa  71.6  0.00000000002  Variovorax paradoxus S110  Bacteria  normal  0.429419  n/a   
 
 
-
 
NC_008752  Aave_2257  LysR family transcriptional regulator  54.24 
 
 
320 aa  61.2  0.00000003  Acidovorax citrulli AAC00-1  Bacteria  normal  0.206337  hitchhiker  0.000000365434 
 
 
-
 
NC_008781  Pnap_2667  LysR family transcriptional regulator  38.33 
 
 
320 aa  49.3  0.0001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_3084  putative transcriptional regulator  40.35 
 
 
315 aa  46.2  0.0007  Pseudomonas aeruginosa PA7  Bacteria  normal  0.654919  n/a   
 
 
-
 
NC_008463  PA14_36180  LysR family transcriptional regulator  40.35 
 
 
315 aa  46.2  0.0008  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.682607  hitchhiker  0.00107493 
 
 
-
 
NC_010322  PputGB1_2950  LysR family transcriptional regulator  40.96 
 
 
315 aa  45.1  0.002  Pseudomonas putida GB-1  Bacteria  normal  0.12495  normal 
 
 
-
 
NC_011369  Rleg2_2915  transcriptional regulator, LysR family  32.76 
 
 
335 aa  43.5  0.005  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0114903  normal 
 
 
-
 
NC_012850  Rleg_3176  transcriptional regulator, LysR family  31.03 
 
 
334 aa  42.7  0.01  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.356855  normal 
 
 
-
 
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