Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4926 |
Symbol | |
ID | 4313817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 1934398 |
End bp | 1935348 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638152769 |
Product | LysR family transcriptional regulator |
Protein accession | YP_776809 |
Protein GI | 115359671 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.181761 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGAAG CCAGCCCATG GGGAAACCGC AGCCGCCTGA AGACGCGCCA GCTCCTGCTG GTCGTCGCGC TCGCCGACGA AGGCAGCATT CACCGCGCGG CGGCCGCGCT GAACATGACG CAGCCGGCCG CGTCGAAGCT GCTGCGCGAG CTCGAGGAAT CGATCGGCGC GGTGCTGTTC GAGCGCCTGC CGCGCGGGAT GCGGCCGACG CTGTACGGCG ACGCGCTGAT CCGCCACGCG CGCGCCGCGC TCGGCAGCCT CGACCAGGCG CGCGAGGAAC TGGCCGCGCT GAAGGCCGGC CATCTCGGGC ATGTGGCGGT GGGCGCGATC ACGTCGCCGG GGTTGCGGCT GGTGCCGCCG GCCGTCGCCG CGGTGAAGGG CACGCATGCG AACGTGCGCG TGTCCGTCGC GATCGACACG AGCAATGCGC TGCTCGAACA TCTCGCGCAG GACAAGCTCG ACATCGTGCT CGGCCGGCTG TCAGCCGAAC ACGACAAGTT GCACCTGCGC TACGAGCCGC TGACCGGCGA GCCGGTCGCG GCGGTCGTGC GGCCCGGCCA TCCGCTGCTC GCGCAGGCGC CGCTATCGCT TGCCGACGTG CAGCGTGCCG CGTGGGTCAT GCCGCCGGCC GGCAGCGTGC TGCGCCACCG CTTCGAGCTG GTGTTCCAGC GCGCGAGCCT CGCGCCGCCC GCGAACGTCG TCGAGACGGC CGCGCTGCTG TTCATCACGC AACTGATCGA GCAGAGCGAC ATGATCGCGG TGCTCGCGGA GGACGTCGCG CTGTACTACG CGCGACATGG CATCGTGTCG GTGCTGCCGC TGGAGATGGA TTGCCGGATG GACGATTTCG GGATCATCAC GCGCACCGAC CGGCTGCATT CGCCGGCCGT CGCGGTGATG GCCGACGCGA TCCGCACGGC CGCGCGGGAG GTGTACGGGG TCGCGTTGTA A
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Protein sequence | MLEASPWGNR SRLKTRQLLL VVALADEGSI HRAAAALNMT QPAASKLLRE LEESIGAVLF ERLPRGMRPT LYGDALIRHA RAALGSLDQA REELAALKAG HLGHVAVGAI TSPGLRLVPP AVAAVKGTHA NVRVSVAIDT SNALLEHLAQ DKLDIVLGRL SAEHDKLHLR YEPLTGEPVA AVVRPGHPLL AQAPLSLADV QRAAWVMPPA GSVLRHRFEL VFQRASLAPP ANVVETAALL FITQLIEQSD MIAVLAEDVA LYYARHGIVS VLPLEMDCRM DDFGIITRTD RLHSPAVAVM ADAIRTAARE VYGVAL
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