Gene Bamb_4926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4926 
Symbol 
ID4313817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1934398 
End bp1935348 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content71% 
IMG OID638152769 
ProductLysR family transcriptional regulator 
Protein accessionYP_776809 
Protein GI115359671 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.181761 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGAAG CCAGCCCATG GGGAAACCGC AGCCGCCTGA AGACGCGCCA GCTCCTGCTG 
GTCGTCGCGC TCGCCGACGA AGGCAGCATT CACCGCGCGG CGGCCGCGCT GAACATGACG
CAGCCGGCCG CGTCGAAGCT GCTGCGCGAG CTCGAGGAAT CGATCGGCGC GGTGCTGTTC
GAGCGCCTGC CGCGCGGGAT GCGGCCGACG CTGTACGGCG ACGCGCTGAT CCGCCACGCG
CGCGCCGCGC TCGGCAGCCT CGACCAGGCG CGCGAGGAAC TGGCCGCGCT GAAGGCCGGC
CATCTCGGGC ATGTGGCGGT GGGCGCGATC ACGTCGCCGG GGTTGCGGCT GGTGCCGCCG
GCCGTCGCCG CGGTGAAGGG CACGCATGCG AACGTGCGCG TGTCCGTCGC GATCGACACG
AGCAATGCGC TGCTCGAACA TCTCGCGCAG GACAAGCTCG ACATCGTGCT CGGCCGGCTG
TCAGCCGAAC ACGACAAGTT GCACCTGCGC TACGAGCCGC TGACCGGCGA GCCGGTCGCG
GCGGTCGTGC GGCCCGGCCA TCCGCTGCTC GCGCAGGCGC CGCTATCGCT TGCCGACGTG
CAGCGTGCCG CGTGGGTCAT GCCGCCGGCC GGCAGCGTGC TGCGCCACCG CTTCGAGCTG
GTGTTCCAGC GCGCGAGCCT CGCGCCGCCC GCGAACGTCG TCGAGACGGC CGCGCTGCTG
TTCATCACGC AACTGATCGA GCAGAGCGAC ATGATCGCGG TGCTCGCGGA GGACGTCGCG
CTGTACTACG CGCGACATGG CATCGTGTCG GTGCTGCCGC TGGAGATGGA TTGCCGGATG
GACGATTTCG GGATCATCAC GCGCACCGAC CGGCTGCATT CGCCGGCCGT CGCGGTGATG
GCCGACGCGA TCCGCACGGC CGCGCGGGAG GTGTACGGGG TCGCGTTGTA A
 
Protein sequence
MLEASPWGNR SRLKTRQLLL VVALADEGSI HRAAAALNMT QPAASKLLRE LEESIGAVLF 
ERLPRGMRPT LYGDALIRHA RAALGSLDQA REELAALKAG HLGHVAVGAI TSPGLRLVPP
AVAAVKGTHA NVRVSVAIDT SNALLEHLAQ DKLDIVLGRL SAEHDKLHLR YEPLTGEPVA
AVVRPGHPLL AQAPLSLADV QRAAWVMPPA GSVLRHRFEL VFQRASLAPP ANVVETAALL
FITQLIEQSD MIAVLAEDVA LYYARHGIVS VLPLEMDCRM DDFGIITRTD RLHSPAVAVM
ADAIRTAARE VYGVAL