| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2950 |
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| Symbol | |
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| ID | 5870735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3301784 |
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| End bp | 3302731 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641548066 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001669178 |
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| Protein GI | 167033947 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.12495 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCGCT CGTCAACCGA CAATACCCAG GTGCCTGCCA GCCTCGGCGC ACTGAAGATC
TCCAGCCGGC AGATCACGTT GCTCAATGCC TTGGGCGAAT TCGGCAACCT GCGCCGTGCG
GCGGCCGCGA TGCACACCAC GCAACCGGCT GCCAGCCTGT TGCTGCAGCA GCTCGAGGAG
CGCCTGGGGG TGCGTTTGTT CGAACGCCTG CCACGGGGTA TGCAAGCGAC GCTGTATGGC
GAGGTGATGA TCCGCTATGC GCAGAACGCG TTGCATGAGT TCGAGCATGC CCAGGCGCAA
ATTGCCGAAC TGGCGCGCGG GGCTTCCGGC CTGGTGCGGG TGGGCAGCGT CATGGGCCCG
GTACCGGGTG TGCTGACCAA GGCGGTGCTG GCCTACAAAC GCGACCACCC CAACGTGCGC
ATCGCCTTGG AAGTAGGCAC CAGCGATACT TTGCTGCCCG CCTTGCTGCG TGGCGACTTC
GACATGGTGG TGGGGCGCCT GCCGGACCAG AGCGACAGCC AGGCGTTGAA CATCGAGCTG
TTCGAAGGCG GTGAACAAAT GCGCGTGATT GCCCGCGCAG GCCATCCCTT GGCTACAGTC
GCCTGCCTGC AGCTAGCCGA TCTGGTGCAC TTGACCTGGA TTCTGCACCC CATCGGCAGC
CCGATGCGCC GCCGCGTCGA AAGCGCATTG CAGGCCGGGG GCATGGTGCA GTCGCTGGAT
ATCGTCGAAA CCGCCTCGAT CCTGGCGACC ACTGCCATGC TCGAAGCGTC TGAAATGATC
GCGGTGGTGC CCAATGACGT GGCCCAGCAC TATGCCCGCT ATGGCATGGT CGCCATCCTG
CCCGTGGAAC TTCCTCTGGC CATGGCCAAC CTTGGCGTGC TGACCCTGCG TTCGCGGCCC
AACTCGGTTG CCCTCGATAC CTTGCTGGGC TATTTGCGCG CTCAATAA
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| Protein sequence | MSRSSTDNTQ VPASLGALKI SSRQITLLNA LGEFGNLRRA AAAMHTTQPA ASLLLQQLEE
RLGVRLFERL PRGMQATLYG EVMIRYAQNA LHEFEHAQAQ IAELARGASG LVRVGSVMGP
VPGVLTKAVL AYKRDHPNVR IALEVGTSDT LLPALLRGDF DMVVGRLPDQ SDSQALNIEL
FEGGEQMRVI ARAGHPLATV ACLQLADLVH LTWILHPIGS PMRRRVESAL QAGGMVQSLD
IVETASILAT TAMLEASEMI AVVPNDVAQH YARYGMVAIL PVELPLAMAN LGVLTLRSRP
NSVALDTLLG YLRAQ
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