| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5481 |
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| Symbol | |
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| ID | 6181489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 2726735 |
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| End bp | 2727685 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641685236 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001812141 |
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| Protein GI | 172064490 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0046066 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTCGAAG CCAGCCCGTG GGGAAACCGC AGCCGCCTGA AGACGCGCCA GCTCCTGCTG
GTCGTCGCGC TCGCCGACGA AGGCAGCATT CACCGCGCAG CAGCCGCGCT GAACATGACG
CAGCCGGCCG CGTCGAAGCT GCTGCGCGAG CTCGAGGATT CGATCGGCGC GGTGCTGTTC
GAGCGCCTGC CGCGCGGGAT GCGCCCGACG CTATACGGCG ACGCACTGAT CCGCCACGCG
CGCGCGGCGC TCGGCAGCCT CGACCAGGCG CGCGAGGAGC TGGCCGCGCT GAAGGCTGGC
CATCTCGGGC ATGTGGCGGT GGGCGCGATC ACGTCGCCGG GGTTGCGGCT CGTGCCGCCG
GCCGTCGCCG CGGTGAAGGG CACGCACGCG AATGTGCGCG TGTCCGTCGC GATCGACACG
AGCAATGCGC TGCTCGAACA TCTCGCGCAG GACAAGCTCG ACATCGTGCT CGGCCGGCTG
TCAGCCGAAC ACGACAAGCT GCACCTGCGC TACGAGCCGC TGACCGGCGA GCCGGTCGCG
GCGGTCGTGC GGCCCGACCA TCCGCTGCTC GCGCAGGCGC CGCTGTCGCT TGCCGACGTG
CAGCGTGCCG CGTGGGTCAT GCCGCCGGCC GGCAGCGTGC TGCGCCACCG CTTCGAGCTC
GTGTTCCAGC GCGCGAGCCT CGCGCCGCCC GCGAACGTCG TCGAGACGGC CGCGCTGCTG
TTCATCACGC AACTGATCGA GCAGAGCGAC ATGATCGCGG TGCTCGCGGA GGACGTCGCG
CTGTACTACG CGCGACACGG CATCGTGTCG GTGCTGCCGC TGGAGATGGA TTGCCGGATG
GACGACTTCG GGATCATCAC GCGCACCGAC CGGCTGCATT CGCCGGCCGT CGCGGTGATG
GCCGACGCGA TCCGCATGGC CGCGCGGGAG GTGTACGGGG TCGCGTTGTA A
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| Protein sequence | MLEASPWGNR SRLKTRQLLL VVALADEGSI HRAAAALNMT QPAASKLLRE LEDSIGAVLF
ERLPRGMRPT LYGDALIRHA RAALGSLDQA REELAALKAG HLGHVAVGAI TSPGLRLVPP
AVAAVKGTHA NVRVSVAIDT SNALLEHLAQ DKLDIVLGRL SAEHDKLHLR YEPLTGEPVA
AVVRPDHPLL AQAPLSLADV QRAAWVMPPA GSVLRHRFEL VFQRASLAPP ANVVETAALL
FITQLIEQSD MIAVLAEDVA LYYARHGIVS VLPLEMDCRM DDFGIITRTD RLHSPAVAVM
ADAIRMAARE VYGVAL
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