22 homologs were found in PanDaTox collection
for query gene Acry_3411 on replicon NC_009468
Organism: Acidiphilium cryptum JF-5



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009468  Acry_3411  carboxymuconolactone decarboxylase  100 
 
 
250 aa  506  9.999999999999999e-143  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B0980  putative gamma-carboxymuconolactone decarboxylase subunit  62.5 
 
 
262 aa  303  1.0000000000000001e-81  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.615831 
 
 
-
 
NC_010505  Mrad2831_3248  carboxymuconolactone decarboxylase  59.34 
 
 
254 aa  296  3e-79  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_5801  carboxymuconolactone decarboxylase  60.34 
 
 
261 aa  292  3e-78  Burkholderia phymatum STM815  Bacteria  normal  0.558099  normal  0.179453 
 
 
-
 
NC_007952  Bxe_B0991  putative gamma-carboxymuconolactone decarboxylase subunit  47.76 
 
 
274 aa  229  3e-59  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.665564 
 
 
-
 
NC_007509  Bcep18194_C7140  carboxymuconolactone decarboxylase  41.98 
 
 
246 aa  207  1e-52  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4714  carboxymuconolactone decarboxylase  52.53 
 
 
135 aa  110  2.0000000000000002e-23  Ralstonia eutropha JMP134  Bacteria  normal  0.0927344  n/a   
 
 
-
 
NC_011981  Avi_7418  gamma-carboxymuconolactone decarboxylase subunit  30.91 
 
 
221 aa  107  1e-22  Agrobacterium vitis S4  Bacteria  decreased coverage  0.0051102  n/a   
 
 
-
 
NC_012857  Rpic12D_3953  Carboxymuconolactone decarboxylase  46.53 
 
 
131 aa  101  1e-20  Ralstonia pickettii 12D  Bacteria  normal  normal  0.247272 
 
 
-
 
NC_010678  Rpic_3840  Carboxymuconolactone decarboxylase  46.53 
 
 
131 aa  101  1e-20  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0317  hypothetical protein  29.84 
 
 
223 aa  99.8  4e-20  Burkholderia xenovorans LB400  Bacteria  normal  0.0237988  normal  0.388122 
 
 
-
 
NC_007794  Saro_1467  hypothetical protein  30.67 
 
 
216 aa  78.6  0.00000000000008  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2098  carboxymuconolactone decarboxylase  29.19 
 
 
295 aa  59.7  0.00000005  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.327283  normal  0.0268513 
 
 
-
 
NC_007955  Mbur_2375  alkylhydroperoxidase-like protein  32.69 
 
 
116 aa  45.4  0.0009  Methanococcoides burtonii DSM 6242  Archaea  normal  0.583402  n/a   
 
 
-
 
NC_007516  Syncc9605_0521  carboxymuconolactone decarboxylase family protein  29.91 
 
 
127 aa  45.4  0.001  Synechococcus sp. CC9605  Bacteria  normal  normal  0.66457 
 
 
-
 
NC_010505  Mrad2831_4447  alkylhydroperoxidase  32.93 
 
 
115 aa  44.7  0.002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0188771  normal 
 
 
-
 
NC_007958  RPD_1262  alkylhydroperoxidase AhpD core  31.94 
 
 
126 aa  43.5  0.003  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.579197 
 
 
-
 
NC_011004  Rpal_1282  alkylhydroperoxidase like protein, AhpD family  33.33 
 
 
123 aa  43.5  0.003  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1372  alkylhydroperoxidase like protein, AhpD family  32.91 
 
 
113 aa  43.5  0.003  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_0074  alkylhydroperoxidase  33.33 
 
 
115 aa  43.1  0.004  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1223  alkylhydroperoxidase like protein, AhpD family  35.87 
 
 
113 aa  42.7  0.005  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.653003  normal 
 
 
-
 
NC_008782  Ajs_1382  alkylhydroperoxidase  34.07 
 
 
114 aa  42.4  0.008  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>