| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1282 |
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| Symbol | |
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| ID | 6408939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1352866 |
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| End bp | 1353237 |
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| Gene Length | 372 bp |
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| Protein Length | 123 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642711181 |
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| Product | alkylhydroperoxidase like protein, AhpD family |
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| Protein accession | YP_001990297 |
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| Protein GI | 192289692 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
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| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCACAAGA ACTGGATCGA TCTGACGGGC GAGTTGTCGG TGGCGCTGCG CGAAGTCCGC
ACCGGCGCGC CGGATGTCAT GAAGGGCTTC TCGGCGATCG CCCAGGCCGC GCTCAAGGCG
AATGCGCTCG ATACCAAAAC CAAGGAGCTG ATCGCTCTGG CGATCTCGGT CGCGACACGG
TGCGATGGCT GCATCGGCTT CCACGCCGAA GCCGCGGTGA AGCACGGCGC GACCCGCGAC
GAGGTGATGG AGACCATGGG CATGGCAATC TACATGGGCG CCGGCCCGAG CGTGATGTAC
GCCGCCCAGG CGGTCGAGGC TTACGATCAG TTCGTCAAGA AGAAGGCCGC GGCGACTTCG
CCTGCGGAGT AA
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| Protein sequence | MHKNWIDLTG ELSVALREVR TGAPDVMKGF SAIAQAALKA NALDTKTKEL IALAISVATR
CDGCIGFHAE AAVKHGATRD EVMETMGMAI YMGAGPSVMY AAQAVEAYDQ FVKKKAAATS
PAE
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