Gene Smal_1372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1372 
Symbol 
ID6475227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1561352 
End bp1561693 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content65% 
IMG OID642730540 
Productalkylhydroperoxidase like protein, AhpD family 
Protein accessionYP_002027760 
Protein GI194365150 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACT GGAATGCCTA CCGCAAGGAG TTGAAGGGCC GTATCGGCGA GATCGGCAAG 
CTTTCACCGG ATACGGTCAA GGGCTACGCG ACGCTGGCCA ATGCCGGCGC GCAGACCAAT
CATCTCGATG CCAAGACCCG CGAGCTGATC GCGCTGGCGG TTGCGGTCAT CACCCGCTGC
GATGGCTGCA TCACCGTACA TGTGGATGCT GCGCTGAAGC ACGGCGCCAG CCGCGAGGAA
ATCGCCGAAG CGCTGGGCGT GGCGGTGTCG CTCAATGCCG GTGCGGCGCT GGTCTATTCG
GCGCGGGTGA TGGATGCCGT GGCCGGGCAC GAGAGCGCGT GA
 
Protein sequence
MLDWNAYRKE LKGRIGEIGK LSPDTVKGYA TLANAGAQTN HLDAKTRELI ALAVAVITRC 
DGCITVHVDA ALKHGASREE IAEALGVAVS LNAGAALVYS ARVMDAVAGH ESA