Gene Rpic_3840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3840 
Symbol 
ID6284936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp87800 
End bp88195 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content61% 
IMG OID642618340 
ProductCarboxymuconolactone decarboxylase 
Protein accessionYP_001892381 
Protein GI187926036 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAA ACGCCCCGAT TGACCCATCC GCAACCCCGG TCTGCGACAG CATGCGCGCC 
ACCGGCAACT GGAATCCCAA CTGGGAGCCC TTTGCAGAAC TTGACCCGGC ATGGACTGAA
AAATTCATGG CCATGGGAGT CATGCCGCAT CGCGTGCTTG ATCCGAAAAC GCTGGAATTC
CTTGCCATTG CCGTCGATGC GTCGTGCACG CACATGTACG CGCCCGGCGT GCGTCGCCAC
ATCCGCAAGG CGCTTGAACT GGGTGCCACC AAAGAAGAGA TCACGGCGGT GCTGCAGGCC
GTGTCGGTGC TCGGCATTCA CAGCATGAGC CTGGGCGCGC CCATCCTGCT GGAAGAACTT
GCCGCCCGCG AGAACACGAC CGCCACCGTG GAATAA
 
Protein sequence
MTTNAPIDPS ATPVCDSMRA TGNWNPNWEP FAELDPAWTE KFMAMGVMPH RVLDPKTLEF 
LAIAVDASCT HMYAPGVRRH IRKALELGAT KEEITAVLQA VSVLGIHSMS LGAPILLEEL
AARENTTATV E