13 homologs were found in PanDaTox collection
for query gene Rpic_3840 on replicon NC_010678
Organism: Ralstonia pickettii 12J



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010678  Rpic_3840  Carboxymuconolactone decarboxylase  100 
 
 		 131 aa  269  8.000000000000001e-72  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012857  Rpic12D_3953  Carboxymuconolactone decarboxylase  100 
 
 		 131 aa  269  8.000000000000001e-72  Ralstonia pickettii 12D  Bacteria  normal  1  normal  0.247272 
 
 
-
 
NC_007348  Reut_B4714  carboxymuconolactone decarboxylase  79.66 
 
 		 135 aa  192  1e-48  Ralstonia eutropha JMP134  Bacteria  normal  0.0927344  n/a   
 
 
-
 
NC_010505  Mrad2831_3248  carboxymuconolactone decarboxylase  45.45 
 
 		 254 aa  100  9e-21  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007952  Bxe_B0980  putative gamma-carboxymuconolactone decarboxylase subunit  50.52 
 
 		 262 aa  99.8  1e-20  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.615831 
 
 
-
 
NC_010625  Bphy_5801  carboxymuconolactone decarboxylase  41.74 
 
 		 261 aa  93.6  9e-19  Burkholderia phymatum STM815  Bacteria  normal  0.558099  normal  0.179453 
 
 
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NC_007952  Bxe_B0991  putative gamma-carboxymuconolactone decarboxylase subunit  45.87 
 
 		 274 aa  92.4  2e-18  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.665564 
 
 
-
 
NC_009468  Acry_3411  carboxymuconolactone decarboxylase  46.53 
 
 		 250 aa  90.1  8e-18  Acidiphilium cryptum JF-5  Bacteria  normal  1  n/a   
 
 
-
 
NC_007509  Bcep18194_C7140  carboxymuconolactone decarboxylase  37.39 
 
 		 246 aa  74.7  0.0000000000004  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011981  Avi_7418  gamma-carboxymuconolactone decarboxylase subunit  33.33 
 
 		 221 aa  60.1  0.000000009  Agrobacterium vitis S4  Bacteria  decreased coverage  0.0051102  n/a   
 
 
-
 
NC_007953  Bxe_C0317  hypothetical protein  38.46 
 
 		 223 aa  48.9  0.00002  Burkholderia xenovorans LB400  Bacteria  normal  0.0237988  normal  0.388122 
 
 
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NC_013223  Dret_1781  Carboxymuconolactone decarboxylase  35.62 
 
 		 107 aa  44.7  0.0005  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.11543  normal  1 
 
 
-
 
NC_007794  Saro_1467  hypothetical protein  29.13 
 
 		 216 aa  41.2  0.005  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  1  n/a   
 
 
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