11 homologs were found in PanDaTox collection
for query gene Avi_7418 on replicon NC_011981
Organism: Agrobacterium vitis S4



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011981  Avi_7418  gamma-carboxymuconolactone decarboxylase subunit  100 
 
 		 221 aa  454  1e-127  Agrobacterium vitis S4  Bacteria  decreased coverage  0.0051102  n/a   
 
 
-
 
NC_009468  Acry_3411  carboxymuconolactone decarboxylase  30.91 
 
 		 250 aa  103  2e-21  Acidiphilium cryptum JF-5  Bacteria  normal  1  n/a   
 
 
-
 
NC_007952  Bxe_B0991  putative gamma-carboxymuconolactone decarboxylase subunit  27.93 
 
 		 274 aa  93.2  3e-18  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.665564 
 
 
-
 
NC_007952  Bxe_B0980  putative gamma-carboxymuconolactone decarboxylase subunit  27.75 
 
 		 262 aa  89.4  4e-17  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.615831 
 
 
-
 
NC_010625  Bphy_5801  carboxymuconolactone decarboxylase  28.05 
 
 		 261 aa  87  2e-16  Burkholderia phymatum STM815  Bacteria  normal  0.558099  normal  0.179453 
 
 
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NC_007509  Bcep18194_C7140  carboxymuconolactone decarboxylase  27.65 
 
 		 246 aa  84  0.000000000000002  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_3248  carboxymuconolactone decarboxylase  25.46 
 
 		 254 aa  80.1  0.00000000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007348  Reut_B4714  carboxymuconolactone decarboxylase  33.72 
 
 		 135 aa  61.6  0.000000009  Ralstonia eutropha JMP134  Bacteria  normal  0.0927344  n/a   
 
 
-
 
NC_010678  Rpic_3840  Carboxymuconolactone decarboxylase  33.33 
 
 		 131 aa  60.1  0.00000002  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012857  Rpic12D_3953  Carboxymuconolactone decarboxylase  33.33 
 
 		 131 aa  60.1  0.00000002  Ralstonia pickettii 12D  Bacteria  normal  1  normal  0.247272 
 
 
-
 
NC_007953  Bxe_C0317  hypothetical protein  26.7 
 
 		 223 aa  55.5  0.0000007  Burkholderia xenovorans LB400  Bacteria  normal  0.0237988  normal  0.388122 
 
 
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