Gene Bcep18194_C7140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_C7140 
Symbol 
ID3734766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007509 
Strand
Start bp716102 
End bp716842 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content63% 
IMG OID637760841 
Productcarboxymuconolactone decarboxylase 
Protein accessionYP_366828 
Protein GI78060253 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACA AATCAGCGCT CAAGGCCGAG TTCGAACGAC TACACGGCTA CTGGAGCGAC 
GTGCACGACC AGGCGCTCGC AGAGGATCCC GTCTTCTTCA ACGATTACCT CGTGATGGCC
CGCGCCGCAC TGGATGCCGG CCATCTCGAG CCCAAACTTT GCGATCTCGT CATGATCGCG
GCGAGCGCGA GCGTCACGCA CCTGAACGGC GACGCGGTTG CGCTGCACAT CCAGGGCGCG
CTGCGTCACG GCGCGACGCG CCGGGAAATC GCGGAGGCCT TGCAGATCTC GTCGGTGCTC
GGCATTCACT CGTACATGGT CGGCGTACCC GTGCTGTTCG AAGAAATCGA GGCAAACGGG
CAGTCGGTCG ATACGGCATT TCCGCTCGAC GAGAAATTCG AGCAGGTCAA ATCGGCGTTC
ACTGCCAGCC GGGGCTACTG GAGCGATCAA CTGACGTCGA TGGTCCGCAG CTCGCCGGCG
TTTTTCGACG GCTATACCGC GTTCTCGTCC ACGCCCTGGC GCGAGGGCAC GCTGGCGCCC
GTCGTCAAGG AACTGCTGTA TGTGGCGATC GACGTATCGA CCACCCACAT GTTCGAGCCG
GGCGTGCGCA TTCATACGCG CAATGCGCTG CGTTACGGCG CGACACCGGC GCAGGTGCTC
CAGGTCATGC AGATCGTCAG TTGCCTCGGC ATGCAGAGTT TCCTGCTCGG CGTTCCGCCG
CTGCGGCGCG CTGCGGCGTA A
 
Protein sequence
MTDKSALKAE FERLHGYWSD VHDQALAEDP VFFNDYLVMA RAALDAGHLE PKLCDLVMIA 
ASASVTHLNG DAVALHIQGA LRHGATRREI AEALQISSVL GIHSYMVGVP VLFEEIEANG
QSVDTAFPLD EKFEQVKSAF TASRGYWSDQ LTSMVRSSPA FFDGYTAFSS TPWREGTLAP
VVKELLYVAI DVSTTHMFEP GVRIHTRNAL RYGATPAQVL QVMQIVSCLG MQSFLLGVPP
LRRAAA