Gene Hhal_0074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0074 
Symbol 
ID4710427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp88297 
End bp88644 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content66% 
IMG OID639854532 
Productalkylhydroperoxidase 
Protein accessionYP_001001671 
Protein GI121996884 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACAAGG ATTGGGCCAG CACCGCGGAC GAGCTCTCTA CCCTCTTCAA AGAGGTCCGC 
AAGGGGCAGC CGGATGTCGC CAAAGGATTC TCGGCCATCG CCCAGGCGGC CACCGCCGAC
GGCGCCCTGT CGCCGAAGAC CAAGGAGCTG ATCGCGGTGG CCATCAGCGT GGCAACCCGC
TGTGACGGCT GTATCGCCTT CCACACCAAG GCGGCGGTCA AGCACGGCGC CACCCGCGAC
GAGATCCTCG AGATGATCGG CGTTTCGGTC TATATGGGCG GCGGCCCGTC GCTCACCTAC
GGCGCCCAGG CGCTTGAGGC CTACGACCAG TTTGCCGCCC AGGGTTAG
 
Protein sequence
MYKDWASTAD ELSTLFKEVR KGQPDVAKGF SAIAQAATAD GALSPKTKEL IAVAISVATR 
CDGCIAFHTK AAVKHGATRD EILEMIGVSV YMGGGPSLTY GAQALEAYDQ FAAQG